Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6625: 14993 - KOG0446 Vacuolar sorting protein VPS1, dynamin, and related proteins, at 1275410 to 1278515 14993 mRNA_6626: 14994 - Hypothetical Protein, at 1278893 to 1279645 14994 mRNA_6627: 14995 - KOG1114 Tripeptidyl peptidase II, at 1280374 to 1283965 14995 mRNA_6628: 14996 - KOG0446 Vacuolar sorting protein VPS1, dynamin, and related proteins, at 1284165 to 1286987 14996 mRNA_6629: 14997 - KOG0538 Glycolate oxidase, at 1287348 to 1288864 14997
Group Condition mRNA_6625 mRNA_6626 mRNA_6627 mRNA_6628 mRNA_6629
14993
14994
14995
14996
14997
ypd buoyancy 40 hrs No Buoyancy Separation 0.5 -1.7 -0.0 -0.3 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -1.0 0.1 -0.0 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 -0.7 0.1 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 -0.2 0.0 -0.3 -0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.6 -0.1 -0.1 0.3
growth on oleic acid YNB Oleic Acid 0.1 -0.8 0.1 0.0 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 -0.2 0.2 -0.0 -0.7
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.2 -0.0 -0.0 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 -0.0 -0.0 -0.0 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 -0.6 -0.3 0.2 0.4
growth on ricinoleic acid YNB Glucose 0.1 -0.3 -0.3 0.1 0.3
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.2 -0.0 -0.0 -0.0
growth on ypd YPD 0.1 0.3 -0.1 0.2 -0.4
growth on oleic acid YNB Glucose -0.1 -0.2 0.1 0.1 0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.5 0.4 -0.1 0.3
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.2 -0.1 0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.2 -0.0 0.0 0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 -0.3 -0.3 0.3 0.6
auxotrophy YNB Glucose 0.2 0.3 -0.1 0.1 0.0
auxotrophy Dropout Complete 0.0 0.5 -0.2 0.1 0.2
auxotrophy YNB Glucose 75mM Methionine 0.2 0.1 0.0 0.3 0.2
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