Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6586: 14954 - SUPERFAMILY--SSF55729, at 1163185 to 1164579 14954 mRNA_6587: 14955 - SUPERFAMILY--SSF57184, at 1165950 to 1167130 14955 mRNA_6588: 14956 - K00966 GMPP mannose-1-phosphate guanylyltransferase, at 1167878 to 1169516 14956 mRNA_6589: 14957 - K12386 CTNS cystinosin, at 1169958 to 1171396 14957 mRNA_6590: 14958 - K03009 RPB12, POLR2K DNA-directed RNA polymerases I, II, and III subunit RPABC4, at 1171853 to 1172203 14958
Group Condition mRNA_6586 mRNA_6587 mRNA_6588 mRNA_6589 mRNA_6590
14954
14955
14956
14957
14958
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.2   -0.2 -1.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.5   -0.5 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.2   -0.1 0.1
auxotrophy Dropout Complete 0.2 -0.2   0.3 -0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 -0.7   -0.2 0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.3 0.1   -0.2 0.3
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.3   0.3 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.0   -0.1 0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.8 -0.7   -0.6 0.7
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.4   -0.2 0.7
growth on oleic acid YNB Glucose -0.2 0.1   -0.0 0.4
growth on ypd YPD -0.2 -0.3   -0.0 0.9
growth on ricinoleic acid YNB Ricinoleic Acid 0.6 0.3   0.0 -0.5
auxotrophy YNB Glucose 0.3 -0.2   0.1 0.4
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.2   -0.1 0.7
growth on oleic acid YNB Oleic Acid 0.0 -0.0   -0.2 0.8
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 0.3   -0.0 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.2   -0.2 0.8
growth on ricinoleic acid YNB Glucose 0.6 -0.1   0.2 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.5 0.3   0.3 -0.2
auxotrophy YNB Glucose 75mM Methionine 0.3 0.1   0.2 0.5
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