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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6551: 14919 - ProSiteProfiles-Zinc finger CCHC-type profile.-PS50158,SMART-zinc finger-SM00343,SUPERFAMILY--SSF57756, at 1073941 to 1075191
14919
mRNA_6552: 14920 - K03127 TAF13 transcription initiation factor TFIID subunit 13, at 1075632 to 1076180
14920
mRNA_6553: 14921 - SUPERFAMILY--SSF52266, at 1077741 to 1079727
14921
mRNA_6554: 14922 - K15258 PARP6_8 poly [ADP-ribose] polymerase 6/8, at 1080694 to 1084243
14922
mRNA_6555: 14923 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 1085124 to 1086396
14923
Group
Condition
mRNA_6551
mRNA_6552
mRNA_6553
mRNA_6554
mRNA_6555
14919
14920
14921
14922
14923
ypd buoyancy
40 hrs No Buoyancy Separation
-1.6
-0.7
-0.8
0.6
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
0.0
0.3
-3.3
0.3
0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-1.3
-0.1
-0.3
-0.2
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.9
0.3
-1.1
-0.2
0.3
ypd buoyancy
40 hrs High Buoyancy
0.0
-0.7
-0.6
-0.0
0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.1
-1.1
-0.0
0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
0.2
-1.2
-0.2
0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.1
-0.2
-0.1
0.3
growth on oleic acid
YNB Oleic Acid
-0.6
0.2
0.4
0.2
-0.1
growth on ypd
YPD
0.2
-0.3
0.3
-0.0
0.3
auxotrophy
Dropout Complete
-1.5
0.6
0.8
0.1
0.6
auxotrophy
YNB Glucose
-0.7
0.4
0.7
0.1
0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
-0.0
0.6
-0.2
0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.4
0.4
0.6
0.1
0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.4
-0.0
1.4
-0.2
0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.7
0.6
0.8
0.2
0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-1.2
0.2
2.0
-0.0
0.3
growth on oleic acid
YNB Glucose
-0.6
0.1
1.5
0.1
0.3
growth on ricinoleic acid
YNB Glucose
0.2
-0.6
2.0
0.1
0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.2
3.4
0.3
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
-0.4
3.3
0.4
0.3
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