Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6551: 14919 - ProSiteProfiles-Zinc finger CCHC-type profile.-PS50158,SMART-zinc finger-SM00343,SUPERFAMILY--SSF57756, at 1073941 to 1075191 14919 mRNA_6552: 14920 - K03127 TAF13 transcription initiation factor TFIID subunit 13, at 1075632 to 1076180 14920 mRNA_6553: 14921 - SUPERFAMILY--SSF52266, at 1077741 to 1079727 14921 mRNA_6554: 14922 - K15258 PARP6_8 poly [ADP-ribose] polymerase 6/8, at 1080694 to 1084243 14922 mRNA_6555: 14923 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 1085124 to 1086396 14923
Group Condition mRNA_6551 mRNA_6552 mRNA_6553 mRNA_6554 mRNA_6555
14919
14920
14921
14922
14923
ypd buoyancy 40 hrs No Buoyancy Separation -1.6 -0.7 -0.8 0.6 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 0.3 -3.3 0.3 0.2
facs on lipid accumulation Sorted No BODIPY Gate -1.3 -0.1 -0.3 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.9 0.3 -1.1 -0.2 0.3
ypd buoyancy 40 hrs High Buoyancy 0.0 -0.7 -0.6 -0.0 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.1 -1.1 -0.0 0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.2 -1.2 -0.2 0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.1 -0.2 -0.1 0.3
growth on oleic acid YNB Oleic Acid -0.6 0.2 0.4 0.2 -0.1
growth on ypd YPD 0.2 -0.3 0.3 -0.0 0.3
auxotrophy Dropout Complete -1.5 0.6 0.8 0.1 0.6
auxotrophy YNB Glucose -0.7 0.4 0.7 0.1 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -0.0 0.6 -0.2 0.3
auxotrophy YNB Glucose 75mM Arginine -0.4 0.4 0.6 0.1 0.3
ypd buoyancy 40 hrs Low Buoyancy -0.4 -0.0 1.4 -0.2 0.3
auxotrophy YNB Glucose 75mM Methionine -0.7 0.6 0.8 0.2 0.4
facs on lipid accumulation Sorted High BODIPY Gate -1.2 0.2 2.0 -0.0 0.3
growth on oleic acid YNB Glucose -0.6 0.1 1.5 0.1 0.3
growth on ricinoleic acid YNB Glucose 0.2 -0.6 2.0 0.1 0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.2 3.4 0.3 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.4 3.3 0.4 0.3
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