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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6550: 14918 - K11374 ELP2 elongator complex protein 2, at 1066227 to 1069568
14918
mRNA_6551: 14919 - ProSiteProfiles-Zinc finger CCHC-type profile.-PS50158,SMART-zinc finger-SM00343,SUPERFAMILY--SSF57756, at 1073941 to 1075191
14919
mRNA_6552: 14920 - K03127 TAF13 transcription initiation factor TFIID subunit 13, at 1075632 to 1076180
14920
mRNA_6553: 14921 - SUPERFAMILY--SSF52266, at 1077741 to 1079727
14921
mRNA_6554: 14922 - K15258 PARP6_8 poly [ADP-ribose] polymerase 6/8, at 1080694 to 1084243
14922
Group
Condition
mRNA_6550
mRNA_6551
mRNA_6552
mRNA_6553
mRNA_6554
14918
14919
14920
14921
14922
facs on lipid accumulation
Sorted No BODIPY Gate
-1.0
-1.3
-0.1
-0.3
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
0.0
0.3
-3.3
0.3
ypd buoyancy
40 hrs No Buoyancy Separation
0.3
-1.6
-0.7
-0.8
0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
-0.9
0.3
-1.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-2.4
-0.4
-0.0
1.4
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
0.1
0.2
-1.2
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.1
0.1
-1.1
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.0
-0.3
-0.1
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-1.1
0.1
-0.0
0.6
-0.2
ypd buoyancy
40 hrs High Buoyancy
0.8
0.0
-0.7
-0.6
-0.0
growth on ypd
YPD
-0.4
0.2
-0.3
0.3
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-1.0
-1.2
0.2
2.0
-0.0
auxotrophy
Dropout Complete
0.2
-1.5
0.6
0.8
0.1
auxotrophy
YNB Glucose
0.0
-0.7
0.4
0.7
0.1
growth on oleic acid
YNB Oleic Acid
0.6
-0.6
0.2
0.4
0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.7
0.6
0.8
0.2
auxotrophy
YNB Glucose 75mM Arginine
0.2
-0.4
0.4
0.6
0.1
growth on oleic acid
YNB Glucose
0.4
-0.6
0.1
1.5
0.1
growth on ricinoleic acid
YNB Glucose
0.4
0.2
-0.6
2.0
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.7
-0.2
-0.2
3.4
0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
1.0
0.2
-0.4
3.3
0.4
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