Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6548: 14916 - K11592 DICER1, DCR1 endoribonuclease Dicer, at 1055237 to 1061964 14916 mRNA_6549: 14917 - KOG0605 NDR and related serine/threonine kinases, at 1062959 to 1066157 14917 mRNA_6550: 14918 - K11374 ELP2 elongator complex protein 2, at 1066227 to 1069568 14918 mRNA_6551: 14919 - ProSiteProfiles-Zinc finger CCHC-type profile.-PS50158,SMART-zinc finger-SM00343,SUPERFAMILY--SSF57756, at 1073941 to 1075191 14919 mRNA_6552: 14920 - K03127 TAF13 transcription initiation factor TFIID subunit 13, at 1075632 to 1076180 14920
Group Condition mRNA_6548 mRNA_6549 mRNA_6550 mRNA_6551 mRNA_6552
14916
14917
14918
14919
14920
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.1 -2.4 -0.4 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.0 -1.0 -1.3 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.2 -1.0 -1.2 0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.0 -0.3 0.3 -1.6 -0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -0.1 -1.1 0.1 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.1 0.1 -0.9 0.3
growth on ypd YPD 0.0 -0.2 -0.4 0.2 -0.3
growth on oleic acid YNB Glucose -0.3 -0.2 0.4 -0.6 0.1
auxotrophy Dropout Complete 0.2 -0.2 0.2 -1.5 0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 0.0 0.0 -0.3 -0.1
auxotrophy YNB Glucose 0.1 -0.2 0.0 -0.7 0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.1 -0.4 0.1 0.2
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.1 -0.2 -0.1 0.1
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.2 -0.0 -0.7 0.6
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.3 0.8 0.0 -0.7
growth on oleic acid YNB Oleic Acid -0.0 -0.1 0.6 -0.6 0.2
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.2 0.2 -0.4 0.4
growth on ricinoleic acid YNB Glucose 0.1 -0.1 0.4 0.2 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 -0.3 0.7 -0.2 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.2 1.0 0.2 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.0 0.2 0.0 0.3
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