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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6547: 14915 - KOG3040 Predicted sugar phosphatase (HAD superfamily), at 1053521 to 1054436
14915
mRNA_6548: 14916 - K11592 DICER1, DCR1 endoribonuclease Dicer, at 1055237 to 1061964
14916
mRNA_6549: 14917 - KOG0605 NDR and related serine/threonine kinases, at 1062959 to 1066157
14917
mRNA_6550: 14918 - K11374 ELP2 elongator complex protein 2, at 1066227 to 1069568
14918
mRNA_6551: 14919 - ProSiteProfiles-Zinc finger CCHC-type profile.-PS50158,SMART-zinc finger-SM00343,SUPERFAMILY--SSF57756, at 1073941 to 1075191
14919
Group
Condition
mRNA_6547
mRNA_6548
mRNA_6549
mRNA_6550
mRNA_6551
14915
14916
14917
14918
14919
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.1
-2.4
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.2
-1.0
-1.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.0
-1.0
-1.3
ypd buoyancy
40 hrs No Buoyancy Separation
0.0
-0.3
0.3
-1.6
auxotrophy
Dropout Complete
0.2
-0.2
0.2
-1.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
-0.1
-1.1
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
-0.1
0.1
-0.9
auxotrophy
YNB Glucose
0.1
-0.2
0.0
-0.7
auxotrophy
YNB Glucose 75mM Methionine
0.2
-0.2
-0.0
-0.7
growth on oleic acid
YNB Glucose
-0.3
-0.2
0.4
-0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.1
-0.4
0.1
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.2
0.2
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
0.0
0.0
-0.3
growth on ypd
YPD
0.0
-0.2
-0.4
0.2
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.1
-0.2
-0.1
growth on oleic acid
YNB Oleic Acid
-0.0
-0.1
0.6
-0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
-0.0
0.2
0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
-0.3
0.7
-0.2
growth on ricinoleic acid
YNB Glucose
0.1
-0.1
0.4
0.2
ypd buoyancy
40 hrs High Buoyancy
0.1
-0.3
0.8
0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
-0.2
1.0
0.2
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