Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6546: 14914 - K01702 LEU1 3-isopropylmalate dehydratase, at 1050588 to 1053356 14914 mRNA_6547: 14915 - KOG3040 Predicted sugar phosphatase (HAD superfamily), at 1053521 to 1054436 14915 mRNA_6548: 14916 - K11592 DICER1, DCR1 endoribonuclease Dicer, at 1055237 to 1061964 14916 mRNA_6549: 14917 - KOG0605 NDR and related serine/threonine kinases, at 1062959 to 1066157 14917 mRNA_6550: 14918 - K11374 ELP2 elongator complex protein 2, at 1066227 to 1069568 14918
Group Condition mRNA_6546 mRNA_6547 mRNA_6548 mRNA_6549 mRNA_6550
14914
14915
14916
14917
14918
ypd buoyancy 40 hrs Low Buoyancy     0.1 -0.1 -2.4
facs on lipid accumulation Sorted High BODIPY Gate     -0.1 -0.2 -1.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy     0.1 -0.1 -1.1
facs on lipid accumulation Sorted No BODIPY Gate     -0.1 -0.0 -1.0
growth on ypd YPD     0.0 -0.2 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy     -0.0 -0.1 -0.4
ypd buoyancy 40 hrs Median Buoyancy     0.1 -0.1 -0.2
auxotrophy YNB Glucose     0.1 -0.2 0.0
growth on oleic acid YNB Glucose     -0.3 -0.2 0.4
auxotrophy YNB Glucose 75mM Methionine     0.2 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy     -0.0 -0.1 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation     -0.0 0.0 0.0
ypd buoyancy 40 hrs No Buoyancy Separation     0.0 -0.3 0.3
auxotrophy YNB Glucose 75mM Arginine     0.1 -0.2 0.2
auxotrophy Dropout Complete     0.2 -0.2 0.2
facs on lipid accumulation Sorted Low BODIPY Gate     0.1 -0.0 0.2
growth on ricinoleic acid YNB Glucose     0.1 -0.1 0.4
growth on oleic acid YNB Oleic Acid     -0.0 -0.1 0.6
growth on ricinoleic acid YNB Methylricinoleic Acid     0.1 -0.3 0.7
ypd buoyancy 40 hrs High Buoyancy     0.1 -0.3 0.8
growth on ricinoleic acid YNB Ricinoleic Acid     -0.0 -0.2 1.0
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