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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6545: 14913 - SUPERFAMILY--SSF103657, at 1049098 to 1050167
14913
mRNA_6546: 14914 - K01702 LEU1 3-isopropylmalate dehydratase, at 1050588 to 1053356
14914
mRNA_6547: 14915 - KOG3040 Predicted sugar phosphatase (HAD superfamily), at 1053521 to 1054436
14915
mRNA_6548: 14916 - K11592 DICER1, DCR1 endoribonuclease Dicer, at 1055237 to 1061964
14916
mRNA_6549: 14917 - KOG0605 NDR and related serine/threonine kinases, at 1062959 to 1066157
14917
Group
Condition
mRNA_6545
mRNA_6546
mRNA_6547
mRNA_6548
mRNA_6549
14913
14914
14915
14916
14917
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
-0.0
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.4
0.1
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.1
-0.2
growth on ypd
YPD
-0.2
0.0
-0.2
growth on oleic acid
YNB Glucose
0.1
-0.3
-0.2
auxotrophy
YNB Glucose
-0.1
0.1
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
0.0
0.0
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
0.1
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.1
0.1
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.0
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.2
0.1
-0.1
growth on ricinoleic acid
YNB Glucose
-0.2
0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
-0.0
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.1
0.1
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
-0.0
-0.1
growth on oleic acid
YNB Oleic Acid
0.2
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
0.1
-0.0
auxotrophy
YNB Glucose 75mM Methionine
0.3
0.2
-0.2
auxotrophy
Dropout Complete
0.3
0.2
-0.2
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