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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6544: 14912 - K02138 ATPeF0D, ATP5H, ATP7 F-type H+-transporting ATPase subunit d, at 1046957 to 1048093
14912
mRNA_6545: 14913 - SUPERFAMILY--SSF103657, at 1049098 to 1050167
14913
mRNA_6546: 14914 - K01702 LEU1 3-isopropylmalate dehydratase, at 1050588 to 1053356
14914
mRNA_6547: 14915 - KOG3040 Predicted sugar phosphatase (HAD superfamily), at 1053521 to 1054436
14915
mRNA_6548: 14916 - K11592 DICER1, DCR1 endoribonuclease Dicer, at 1055237 to 1061964
14916
Group
Condition
mRNA_6544
mRNA_6545
mRNA_6546
mRNA_6547
mRNA_6548
14912
14913
14914
14915
14916
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.4
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.1
growth on ypd
YPD
-0.2
0.0
growth on oleic acid
YNB Glucose
0.1
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.2
0.1
auxotrophy
YNB Glucose
-0.1
0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
0.1
growth on ricinoleic acid
YNB Glucose
-0.2
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
0.0
0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
-0.0
ypd buoyancy
40 hrs High Buoyancy
0.1
0.1
growth on oleic acid
YNB Oleic Acid
0.2
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
0.1
auxotrophy
YNB Glucose 75mM Methionine
0.3
0.2
auxotrophy
Dropout Complete
0.3
0.2
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