Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6532: 14900 - K11352 NDUFA12 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12, at 1015408 to 1016084 14900 mRNA_6533: 14901 - Hypothetical Protein, at 1016607 to 1018087 14901 mRNA_6534: 14902 - HMMPfam-Opy2 protein-PF09463, at 1018773 to 1021328 14902 mRNA_6535: 14903 - KOG0715 Molecular chaperone (DnaJ superfamily), at 1022471 to 1023493 14903 mRNA_6536: 14904 - HMMPfam-Protein of unknown function (DUF837)-PF05769, at 1023887 to 1025304 14904
Group Condition mRNA_6532 mRNA_6533 mRNA_6534 mRNA_6535 mRNA_6536
14900
14901
14902
14903
14904
growth on ricinoleic acid YNB Methylricinoleic Acid -2.2 0.5 -2.3 0.1 1.4
growth on ricinoleic acid YNB Ricinoleic Acid -1.7 0.8 -3.2 0.1 1.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.7 -1.0 0.2 -0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.0 -0.2 -0.6 0.2 -0.8
facs on lipid accumulation Sorted No BODIPY Gate 0.4 -0.5 -0.9 0.4 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.4 0.0 0.1 -0.9 0.2
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.6 -0.6 0.2 0.9
growth on oleic acid YNB Oleic Acid -1.2 0.3 0.1 -0.1 1.1
growth on ricinoleic acid YNB Glucose -0.3 -0.1 -0.5 0.3 0.8
ypd buoyancy 40 hrs No Buoyancy Separation -1.1 0.4 1.1 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.6 0.8 -0.4 -0.4 -0.1
auxotrophy YNB Glucose -0.0 -0.0 -0.3 -0.1 0.9
buoyancy on lipid accumulation 40 hrs High Buoyancy 1.0 1.6 -0.9 -0.9 -0.2
auxotrophy YNB Glucose 75mM Methionine 0.3 0.2 -0.6 0.4 0.8
ypd buoyancy 40 hrs High Buoyancy 0.3 1.2 -0.2 0.0 -0.3
auxotrophy Dropout Complete -0.2 -0.2 0.8 -0.1 1.0
ypd buoyancy 40 hrs Low Buoyancy -0.4 0.7 0.2 0.5 0.2
growth on oleic acid YNB Glucose -0.1 0.3 0.2 0.1 0.8
ypd buoyancy 40 hrs Median Buoyancy 0.5 0.4 0.3 0.3 0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 1.3 0.3 -0.7 0.0 0.8
growth on ypd YPD 0.4 2.2 -0.9 0.2 0.3
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