Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6530: 14898 - K03809 wrbA NAD(P)H dehydrogenase (quinone), at 1010809 to 1011597 14898 mRNA_6531: 14899 - K19940 SEC2 Rab guanine nucleotide exchange factor SEC2, at 1011977 to 1014833 14899 mRNA_6532: 14900 - K11352 NDUFA12 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12, at 1015408 to 1016084 14900 mRNA_6533: 14901 - Hypothetical Protein, at 1016607 to 1018087 14901 mRNA_6534: 14902 - HMMPfam-Opy2 protein-PF09463, at 1018773 to 1021328 14902
Group Condition mRNA_6530 mRNA_6531 mRNA_6532 mRNA_6533 mRNA_6534
14898
14899
14900
14901
14902
growth on ricinoleic acid YNB Ricinoleic Acid 0.4 -1.2 -1.7 0.8 -3.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.6 -0.7 -2.2 0.5 -2.3
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.6 -0.4 -0.7 -1.0
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -1.5 0.0 -0.2 -0.6
facs on lipid accumulation Sorted No BODIPY Gate 0.8 -1.5 0.4 -0.5 -0.9
growth on oleic acid YNB Oleic Acid -0.1 -0.2 -1.2 0.3 0.1
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.4 0.3 0.2 -0.6
auxotrophy YNB Glucose 75mM Arginine -0.1 0.2 0.1 -0.6 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation -0.8 -0.4 -1.1 0.4 1.1
auxotrophy YNB Glucose -0.2 0.1 -0.0 -0.0 -0.3
growth on ricinoleic acid YNB Glucose 0.6 -0.0 -0.3 -0.1 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.4 0.4 0.0 0.1
growth on oleic acid YNB Glucose -0.3 0.0 -0.1 0.3 0.2
ypd buoyancy 40 hrs Low Buoyancy -0.3 0.2 -0.4 0.7 0.2
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.3 0.3 1.2 -0.2
auxotrophy Dropout Complete -0.2 0.6 -0.2 -0.2 0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 -0.4 0.6 0.8 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.0 0.5 0.4 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.4 -0.4 1.0 1.6 -0.9
growth on ypd YPD 0.3 0.1 0.4 2.2 -0.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.9 0.3 1.3 0.3 -0.7
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