Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6529: 14897 - K03626 EGD2, NACA nascent polypeptide-associated complex subunit alpha, at 1008919 to 1009693 14897 mRNA_6530: 14898 - K03809 wrbA NAD(P)H dehydrogenase (quinone), at 1010809 to 1011597 14898 mRNA_6531: 14899 - K19940 SEC2 Rab guanine nucleotide exchange factor SEC2, at 1011977 to 1014833 14899 mRNA_6532: 14900 - K11352 NDUFA12 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12, at 1015408 to 1016084 14900 mRNA_6533: 14901 - Hypothetical Protein, at 1016607 to 1018087 14901
Group Condition mRNA_6529 mRNA_6530 mRNA_6531 mRNA_6532 mRNA_6533
14897
14898
14899
14900
14901
facs on lipid accumulation Sorted High BODIPY Gate -0.7 -0.4 -1.5 0.0 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -1.0 0.1 -0.6 -0.4 -0.7
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -0.8 -0.4 -1.1 0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 0.6 -0.7 -2.2 0.5
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 0.4 -1.2 -1.7 0.8
facs on lipid accumulation Sorted No BODIPY Gate -0.5 0.8 -1.5 0.4 -0.5
growth on oleic acid YNB Oleic Acid 0.8 -0.1 -0.2 -1.2 0.3
growth on ricinoleic acid YNB Glucose -0.4 0.6 -0.0 -0.3 -0.1
growth on oleic acid YNB Glucose 0.1 -0.3 0.0 -0.1 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.0 -0.4 0.4 0.0
auxotrophy YNB Glucose 75mM Arginine 0.6 -0.1 0.2 0.1 -0.6
auxotrophy YNB Glucose 0.5 -0.2 0.1 -0.0 -0.0
auxotrophy YNB Glucose 75mM Methionine 0.8 -0.4 -0.4 0.3 0.2
auxotrophy Dropout Complete 0.6 -0.2 0.6 -0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.3 -0.3 0.2 -0.4 0.7
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.3 -0.3 0.3 1.2
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.1 0.0 0.5 0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.3 -0.4 0.6 0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 0.9 0.3 1.3 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 0.4 -0.4 1.0 1.6
growth on ypd YPD 0.1 0.3 0.1 0.4 2.2
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