Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6528: 14896 - K01514 PRUNE, PPX1 exopolyphosphatase, at 1007263 to 1008621 14896 mRNA_6529: 14897 - K03626 EGD2, NACA nascent polypeptide-associated complex subunit alpha, at 1008919 to 1009693 14897 mRNA_6530: 14898 - K03809 wrbA NAD(P)H dehydrogenase (quinone), at 1010809 to 1011597 14898 mRNA_6531: 14899 - K19940 SEC2 Rab guanine nucleotide exchange factor SEC2, at 1011977 to 1014833 14899 mRNA_6532: 14900 - K11352 NDUFA12 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12, at 1015408 to 1016084 14900
Group Condition mRNA_6528 mRNA_6529 mRNA_6530 mRNA_6531 mRNA_6532
14896
14897
14898
14899
14900
facs on lipid accumulation Sorted High BODIPY Gate -1.9 -0.7 -0.4 -1.5 0.0
growth on ricinoleic acid YNB Ricinoleic Acid -1.5 0.3 0.4 -1.2 -1.7
growth on ricinoleic acid YNB Methylricinoleic Acid -0.9 0.0 0.6 -0.7 -2.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 0.2 -0.8 -0.4 -1.1
facs on lipid accumulation Sorted No BODIPY Gate -1.2 -0.5 0.8 -1.5 0.4
growth on oleic acid YNB Glucose -1.4 0.1 -0.3 0.0 -0.1
growth on ricinoleic acid YNB Glucose -0.7 -0.4 0.6 -0.0 -0.3
growth on oleic acid YNB Oleic Acid -0.2 0.8 -0.1 -0.2 -1.2
facs on lipid accumulation Sorted Low BODIPY Gate 1.2 -1.0 0.1 -0.6 -0.4
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.1 -0.3 -0.3 0.3
auxotrophy YNB Glucose 75mM Methionine -0.6 0.8 -0.4 -0.4 0.3
growth on ypd YPD -1.2 0.1 0.3 0.1 0.4
auxotrophy Dropout Complete -0.9 0.6 -0.2 0.6 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.1 -0.0 -0.4 0.4
auxotrophy YNB Glucose -0.2 0.5 -0.2 0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.6 0.6 -0.1 0.2 0.1
ypd buoyancy 40 hrs Low Buoyancy 0.5 0.3 -0.3 0.2 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.1 0.3 -0.4 0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.0 0.4 -0.4 1.0
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.1 -0.1 0.0 0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy 1.0 -0.3 0.9 0.3 1.3
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