Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6524: 14892 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 999531 to 1001982 14892 mRNA_6525: 14893 - HMMPfam-WD domain, G-beta repeat-PF00400,ProSiteProfiles-Trp-Asp (WD) repeats profile.-PS50082,ProSiteProfiles-Trp-Asp (WD) repeats circular profile.-PS50294,ProSiteProfiles-LIS1 homology (LisH) motif profile.-PS50896,SMART-WD40 repeats-SM00320,SUPERFAMILY--SSF50978, at 1002265 to 1003923 14893 mRNA_6526: 14894 - KOG2929 Transcription factor, component of CCR4 transcriptional complex, at 1004889 to 1006380 14894 mRNA_6527: 14895 - K18178 COA5, PET191 cytochrome c oxidase assembly factor 5, at 1006595 to 1007064 14895 mRNA_6528: 14896 - K01514 PRUNE, PPX1 exopolyphosphatase, at 1007263 to 1008621 14896
Group Condition mRNA_6524 mRNA_6525 mRNA_6526 mRNA_6527 mRNA_6528
14892
14893
14894
14895
14896
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.6     -1.5
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 -1.2     -0.9
facs on lipid accumulation Sorted High BODIPY Gate 0.1 0.1     -1.9
growth on ricinoleic acid YNB Glucose -0.1 -0.8     -0.7
growth on oleic acid YNB Glucose 0.1 -0.1     -1.4
facs on lipid accumulation Sorted No BODIPY Gate 0.4 -0.2     -1.2
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.2     -0.3
growth on oleic acid YNB Oleic Acid 0.2 -0.4     -0.2
growth on ypd YPD 0.5 0.4     -1.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.4     0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.0 0.1     -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.3     0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.4 -0.3     -0.3
auxotrophy Dropout Complete 0.5 0.3     -0.9
auxotrophy YNB Glucose 0.4 -0.0     -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.0 -0.3     0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 0.1     -0.1
auxotrophy YNB Glucose 75mM Arginine 0.5 0.5     -0.6
auxotrophy YNB Glucose 75mM Methionine 0.7 0.3     -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 -0.3     1.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.1     1.2
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