Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6521: 14889 - K14788 NOL10, ENP2 ribosome biogenesis protein ENP2, at 989346 to 992026 14889 mRNA_6522: 14890 - K19871 SALL sal-like protein, at 992279 to 994205 14890 mRNA_6523: 14891 - K14567 UTP14 U3 small nucleolar RNA-associated protein 14, at 995570 to 999222 14891 mRNA_6524: 14892 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 999531 to 1001982 14892 mRNA_6525: 14893 - HMMPfam-WD domain, G-beta repeat-PF00400,ProSiteProfiles-Trp-Asp (WD) repeats profile.-PS50082,ProSiteProfiles-Trp-Asp (WD) repeats circular profile.-PS50294,ProSiteProfiles-LIS1 homology (LisH) motif profile.-PS50896,SMART-WD40 repeats-SM00320,SUPERFAMILY--SSF50978, at 1002265 to 1003923 14893
Group Condition mRNA_6521 mRNA_6522 mRNA_6523 mRNA_6524 mRNA_6525
14889
14890
14891
14892
14893
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.2   0.1 -1.2
growth on ricinoleic acid YNB Ricinoleic Acid   -0.4   -0.2 -0.6
growth on ricinoleic acid YNB Glucose   -0.1   -0.1 -0.8
ypd buoyancy 40 hrs Median Buoyancy   -0.0   -0.1 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.3   -0.0 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate   0.1   -0.2 -0.1
growth on oleic acid YNB Oleic Acid   -0.0   0.2 -0.4
ypd buoyancy 40 hrs High Buoyancy   0.3   -0.3 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation   -0.3   0.0 0.1
ypd buoyancy 40 hrs Low Buoyancy   0.2   0.0 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.2   0.0 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.1   0.4 -0.3
growth on oleic acid YNB Glucose   0.1   0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.2   0.2 0.1
facs on lipid accumulation Sorted High BODIPY Gate   0.1   0.1 0.1
auxotrophy YNB Glucose   -0.2   0.4 -0.0
facs on lipid accumulation Sorted No BODIPY Gate   0.2   0.4 -0.2
auxotrophy Dropout Complete   -0.2   0.5 0.3
auxotrophy YNB Glucose 75mM Arginine   -0.2   0.5 0.5
auxotrophy YNB Glucose 75mM Methionine   -0.1   0.7 0.3
growth on ypd YPD   0.1   0.5 0.4
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