Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6510: 14878 - K00818 E2.6.1.11, argD acetylornithine aminotransferase, at 955523 to 957319 14878 mRNA_6511: 14879 - KOG1061 Vesicle coat complex AP-1/AP-2/AP-4, beta subunit, at 957462 to 960234 14879 mRNA_6512: 14880 - KOG1089 Myotubularin-related phosphatidylinositol 3-phosphate 3-phosphatase MTM6, at 960935 to 963520 14880 mRNA_6513: 14881 - HMMPfam-Glycosyl transferase family 90-PF05686,SMART-Putative lipopolysaccharide-modifying enzyme.-SM00672, at 964907 to 967353 14881 mRNA_6514: 14882 - KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter, at 968322 to 969938 14882
Group Condition mRNA_6510 mRNA_6511 mRNA_6512 mRNA_6513 mRNA_6514
14878
14879
14880
14881
14882
facs on lipid accumulation Sorted Low BODIPY Gate -0.3   0.2 -1.4 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.0   0.0 -0.8 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.7   0.1 -0.6 -0.0
growth on ricinoleic acid YNB Glucose -1.5   -0.4 0.8 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.7   -0.2 0.4 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7   -0.1 0.3 -0.4
auxotrophy YNB Glucose 75mM Methionine -1.1   -0.6 0.4 0.4
auxotrophy YNB Glucose -1.5   -0.4 0.6 0.4
facs on lipid accumulation Sorted High BODIPY Gate -1.0   0.3 0.6 -0.7
growth on oleic acid YNB Glucose -1.1   0.1 0.7 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation 0.2   0.2 -0.5 -0.4
ypd buoyancy 40 hrs High Buoyancy 0.1   -0.1 -0.4 -0.0
ypd buoyancy 40 hrs Median Buoyancy 0.1   -0.0 -0.5 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1   -0.1 0.7 -0.7
auxotrophy YNB Glucose 75mM Arginine 0.1   -0.6 0.4 0.1
auxotrophy Dropout Complete -0.0   -0.5 1.0 0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.4   -0.4 1.9 -0.1
growth on ypd YPD -0.3   0.2 0.4 0.7
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1   -0.5 1.8 0.0
ypd buoyancy 40 hrs Low Buoyancy 0.3   0.2 1.5 -0.1
growth on oleic acid YNB Oleic Acid 0.3   0.1 1.3 0.3
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