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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6496: 14864 - HMMPfam-Fungal protein of unknown function (DUF1748)-PF08520, at 927095 to 927579
14864
mRNA_6497: 14865 - HMMPfam-Peptidase family M28-PF04389,SUPERFAMILY--SSF53187, at 927670 to 929364
14865
mRNA_6498: 14866 - K00226 pyrD dihydroorotate dehydrogenase (fumarate), at 929512 to 931049
14866
mRNA_6499: 14867 - K12668 OST2, DAD1 oligosaccharyltransferase complex subunit epsilon, at 931103 to 931809
14867
mRNA_6500: 14868 - K14416 HBS1 elongation factor 1 alpha-like protein, at 933622 to 935186
14868
Group
Condition
mRNA_6496
mRNA_6497
mRNA_6498
mRNA_6499
mRNA_6500
14864
14865
14866
14867
14868
ypd buoyancy
40 hrs No Buoyancy Separation
0.4
-3.7
0.9
auxotrophy
YNB Glucose
-0.2
-0.5
-1.2
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.5
-1.0
auxotrophy
YNB Glucose 75mM Methionine
0.3
-0.8
-0.7
growth on oleic acid
YNB Oleic Acid
-0.1
-0.4
-0.5
auxotrophy
Dropout Complete
0.2
-0.4
-0.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
0.1
-0.9
growth on ypd
YPD
-0.0
-0.7
-0.1
growth on ricinoleic acid
YNB Glucose
0.1
0.4
-1.3
growth on oleic acid
YNB Glucose
0.1
-0.2
-0.6
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.0
-0.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.3
-0.1
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.1
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.0
0.1
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.3
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
0.4
-0.6
ypd buoyancy
40 hrs High Buoyancy
0.0
0.3
-0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
0.0
-0.3
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
0.3
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
-0.0
0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
0.0
0.2
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