Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6488: 14856 - K01655 LYS21, LYS20 homocitrate synthase, at 905172 to 907549 14856 mRNA_6489: 14857 - KOG0327 Translation initiation factor 4F, helicase subunit (eIF-4A) and related helicases, at 907944 to 911303 14857 mRNA_6490: 14858 - KOG1698 Mitochondrial/chloroplast ribosomal protein L19, at 911663 to 912456 14858 mRNA_6491: 14859 - KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins, at 912748 to 918213 14859 mRNA_6492: 14860 - KOG3269 Predicted membrane protein, at 918835 to 919868 14860
Group Condition mRNA_6488 mRNA_6489 mRNA_6490 mRNA_6491 mRNA_6492
14856
14857
14858
14859
14860
facs on lipid accumulation Sorted Low BODIPY Gate -4.1 0.3   0.2 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -3.2 -0.0   -0.0 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -3.3 -0.1   0.1 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -2.8 0.2   0.0 -0.9
auxotrophy YNB Glucose -3.9 0.9   0.0 -0.2
auxotrophy YNB Glucose 75mM Arginine -4.3 0.9   0.1 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -3.2 0.3   0.0 -0.2
auxotrophy YNB Glucose 75mM Methionine -4.3 0.9   0.0 0.4
facs on lipid accumulation Sorted No BODIPY Gate -3.9 0.2   0.2 0.6
facs on lipid accumulation Sorted High BODIPY Gate -3.1 0.2   0.1 -0.0
growth on oleic acid YNB Glucose -3.8 0.8   0.1 0.1
growth on ricinoleic acid YNB Glucose -2.7 0.7   -0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -2.8 1.6   0.0 -0.9
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 -0.7   -0.3 0.2
growth on oleic acid YNB Oleic Acid -2.9 1.0   0.3 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -2.0 1.2   0.1 -0.3
growth on ypd YPD -0.7 0.2   0.1 0.2
ypd buoyancy 40 hrs Low Buoyancy -0.5 0.2   0.1 0.1
auxotrophy Dropout Complete -1.5 1.0   0.3 0.2
ypd buoyancy 40 hrs Median Buoyancy 0.7 0.0   -0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy 0.9 -0.1   0.1 -0.2
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