Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6485: 14853 - K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase, at 898441 to 899753 14853 mRNA_6486: 14854 - K08294 MKK1_2 mitogen-activated protein kinase kinase, at 900253 to 901810 14854 mRNA_6487: 14855 - K11237 BEM1 bud emergence protein 1, at 902586 to 904816 14855 mRNA_6488: 14856 - K01655 LYS21, LYS20 homocitrate synthase, at 905172 to 907549 14856 mRNA_6489: 14857 - KOG0327 Translation initiation factor 4F, helicase subunit (eIF-4A) and related helicases, at 907944 to 911303 14857
Group Condition mRNA_6485 mRNA_6486 mRNA_6487 mRNA_6488 mRNA_6489
14853
14854
14855
14856
14857
ypd buoyancy 40 hrs No Buoyancy Separation -1.6 0.3 -0.2 -1.0 -0.7
facs on lipid accumulation Sorted No BODIPY Gate 0.5 -0.0 0.5 -3.9 0.2
auxotrophy YNB Glucose 75mM Methionine 0.2 0.0 0.6 -4.3 0.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy 1.0 0.0 -0.5 -3.2 0.3
growth on oleic acid YNB Glucose -0.1 -0.0 0.7 -3.8 0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy 1.0 -0.1 0.4 -3.3 -0.1
auxotrophy YNB Glucose -0.1 0.5 0.6 -3.9 0.9
auxotrophy YNB Glucose 75mM Arginine 0.3 0.6 0.7 -4.3 0.9
facs on lipid accumulation Sorted Low BODIPY Gate 0.9 0.7 0.4 -4.1 0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.2 0.2 0.8 -3.1 0.2
growth on oleic acid YNB Oleic Acid -0.1 -0.1 0.7 -2.9 1.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 1.2 0.1 0.5 -3.2 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 1.2 0.2 0.2 -2.8 0.2
growth on ypd YPD -0.4 0.3 -0.2 -0.7 0.2
growth on ricinoleic acid YNB Glucose 0.4 0.5 0.6 -2.7 0.7
ypd buoyancy 40 hrs Low Buoyancy -0.4 -0.0 0.4 -0.5 0.2
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.1 -0.0 0.9 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 -0.1 0.7 0.0
auxotrophy Dropout Complete 0.2 0.2 0.6 -1.5 1.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.9 0.6 1.0 -2.8 1.6
growth on ricinoleic acid YNB Methylricinoleic Acid 1.1 0.7 1.2 -2.0 1.2
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