Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6483: 14851 - Hypothetical Protein, at 894956 to 895414 14851 mRNA_6484: 14852 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 895404 to 896559 14852 mRNA_6485: 14853 - K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase, at 898441 to 899753 14853 mRNA_6486: 14854 - K08294 MKK1_2 mitogen-activated protein kinase kinase, at 900253 to 901810 14854 mRNA_6487: 14855 - K11237 BEM1 bud emergence protein 1, at 902586 to 904816 14855
Group Condition mRNA_6483 mRNA_6484 mRNA_6485 mRNA_6486 mRNA_6487
14851
14852
14853
14854
14855
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 -1.1 -1.6 0.3 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.4 -0.4 -0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.5 -0.4 -0.0 0.4
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.4 -0.1 -0.0 -0.1
growth on ypd YPD -0.6 0.3 -0.4 0.3 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.7 -0.2 0.5 -0.0 0.5
growth on oleic acid YNB Oleic Acid -0.1 -0.1 -0.1 -0.1 0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -0.1 1.0 0.0 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.1 0.2 0.2 0.8
auxotrophy YNB Glucose 0.2 -0.6 -0.1 0.5 0.6
auxotrophy YNB Glucose 75mM Methionine 0.4 -0.4 0.2 0.0 0.6
growth on oleic acid YNB Glucose -0.0 0.2 -0.1 -0.0 0.7
auxotrophy Dropout Complete 0.6 -0.5 0.2 0.2 0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.3 0.9 0.7 0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 0.1 1.0 -0.1 0.4
auxotrophy YNB Glucose 75mM Arginine 0.4 -0.6 0.3 0.6 0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 0.0 1.2 0.2 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -0.1 1.2 0.1 0.5
growth on ricinoleic acid YNB Glucose 0.2 0.3 0.4 0.5 0.6
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 0.2 0.9 0.6 1.0
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 0.1 1.1 0.7 1.2
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