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Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6483: 14851 - Hypothetical Protein, at 894956 to 895414
14851
mRNA_6484: 14852 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 895404 to 896559
14852
mRNA_6485: 14853 - K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase, at 898441 to 899753
14853
mRNA_6486: 14854 - K08294 MKK1_2 mitogen-activated protein kinase kinase, at 900253 to 901810
14854
mRNA_6487: 14855 - K11237 BEM1 bud emergence protein 1, at 902586 to 904816
14855
Group
Condition
mRNA_6483
mRNA_6484
mRNA_6485
mRNA_6486
mRNA_6487
14851
14852
14853
14854
14855
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
-1.1
-1.6
0.3
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.4
-0.4
-0.1
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.5
-0.4
-0.0
0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.4
-0.1
-0.0
-0.1
growth on ypd
YPD
-0.6
0.3
-0.4
0.3
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.7
-0.2
0.5
-0.0
0.5
growth on oleic acid
YNB Oleic Acid
-0.1
-0.1
-0.1
-0.1
0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
-0.1
1.0
0.0
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
-0.1
0.2
0.2
0.8
auxotrophy
YNB Glucose
0.2
-0.6
-0.1
0.5
0.6
auxotrophy
YNB Glucose 75mM Methionine
0.4
-0.4
0.2
0.0
0.6
growth on oleic acid
YNB Glucose
-0.0
0.2
-0.1
-0.0
0.7
auxotrophy
Dropout Complete
0.6
-0.5
0.2
0.2
0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.3
0.9
0.7
0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
0.1
1.0
-0.1
0.4
auxotrophy
YNB Glucose 75mM Arginine
0.4
-0.6
0.3
0.6
0.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.0
0.0
1.2
0.2
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
-0.1
1.2
0.1
0.5
growth on ricinoleic acid
YNB Glucose
0.2
0.3
0.4
0.5
0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
0.2
0.9
0.6
1.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
0.1
1.1
0.7
1.2
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