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Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6481: 14849 - K02201 E2.7.7.3B pantetheine-phosphate adenylyltransferase, at 892037 to 893331
14849
mRNA_6482: 14850 - Hypothetical Protein, at 893524 to 894299
14850
mRNA_6483: 14851 - Hypothetical Protein, at 894956 to 895414
14851
mRNA_6484: 14852 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 895404 to 896559
14852
mRNA_6485: 14853 - K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase, at 898441 to 899753
14853
Group
Condition
mRNA_6481
mRNA_6482
mRNA_6483
mRNA_6484
mRNA_6485
14849
14850
14851
14852
14853
ypd buoyancy
40 hrs No Buoyancy Separation
-1.1
0.1
-1.1
-1.6
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.1
-0.4
-0.4
auxotrophy
YNB Glucose
-0.3
0.2
-0.6
-0.1
ypd buoyancy
40 hrs Low Buoyancy
0.5
-0.3
-0.5
-0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.2
-0.4
-0.1
growth on ypd
YPD
0.4
-0.6
0.3
-0.4
auxotrophy
Dropout Complete
-0.6
0.6
-0.5
0.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
-0.7
-0.2
0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.3
0.4
-0.6
0.3
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
-0.4
-0.1
0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.2
0.4
-0.4
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.4
-0.3
0.9
growth on oleic acid
YNB Oleic Acid
0.6
-0.1
-0.1
-0.1
growth on oleic acid
YNB Glucose
0.3
-0.0
0.2
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
0.0
0.0
1.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
0.1
-0.1
1.2
growth on ricinoleic acid
YNB Glucose
0.1
0.2
0.3
0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
0.1
-0.1
1.0
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
0.2
0.2
0.9
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.5
0.0
0.1
1.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.7
0.3
0.1
1.1
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