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Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6473: 14841 - HMMPfam-XPG domain containing-PF12813,SUPERFAMILY--SSF88723, at 869282 to 871336
14841
mRNA_6474: 14842 - HMMPfam-Vitamin-D-receptor interacting Mediator subunit 4-PF10018, at 871729 to 872994
14842
mRNA_6475: 14843 - KOG3442 Uncharacterized conserved protein, at 873206 to 873968
14843
mRNA_6476: 14844 - KOG0054 Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily, at 874196 to 881716
14844
mRNA_6477: 14845 - HMMPfam-Catalytic LigB subunit of aromatic ring-opening dioxygenase-PF02900,SUPERFAMILY--SSF53213, at 882440 to 883452
14845
Group
Condition
mRNA_6473
mRNA_6474
mRNA_6475
mRNA_6476
mRNA_6477
14841
14842
14843
14844
14845
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.0
-0.0
-1.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
0.2
0.0
-0.7
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.0
-0.2
0.0
growth on oleic acid
YNB Glucose
-0.3
0.0
-0.1
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
0.0
0.1
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
0.5
0.2
-0.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
-0.3
0.0
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.6
-0.5
0.3
-0.8
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
-0.2
0.0
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
-0.5
0.1
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
0.9
0.2
-1.0
growth on ypd
YPD
-0.4
0.3
0.2
-0.3
growth on oleic acid
YNB Oleic Acid
-0.2
0.4
0.0
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
0.4
0.4
-0.6
auxotrophy
YNB Glucose 75mM Methionine
0.2
0.2
0.1
-0.5
ypd buoyancy
40 hrs Median Buoyancy
0.3
-0.2
-0.0
-0.0
auxotrophy
YNB Glucose
0.1
0.2
0.0
-0.0
auxotrophy
Dropout Complete
0.1
0.6
0.2
-0.4
ypd buoyancy
40 hrs Low Buoyancy
0.3
0.1
0.0
0.1
growth on ricinoleic acid
YNB Glucose
-0.1
1.2
0.0
-0.4
ypd buoyancy
40 hrs High Buoyancy
0.4
0.2
-0.0
0.2
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