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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6463: 14831 - K10427 DCTN5 dynactin 5, at 844164 to 845248
14831
mRNA_6464: 14832 - KOG1609 Protein involved in mRNA turnover and stability, at 845418 to 846912
14832
mRNA_6465: 14833 - Hypothetical Protein, at 847070 to 847704
14833
mRNA_6466: 14834 - Hypothetical Protein, at 848394 to 849782
14834
mRNA_6467: 14835 - K20242 EVI5 ecotropic viral integration site 5 protein, at 850077 to 853413
14835
Group
Condition
mRNA_6463
mRNA_6464
mRNA_6465
mRNA_6466
mRNA_6467
14831
14832
14833
14834
14835
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-2.4
-0.5
-0.3
0.2
0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-2.4
-0.1
0.3
-0.1
0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-1.2
0.3
-0.2
0.0
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.2
-0.6
-0.2
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-1.0
0.7
-0.0
-0.3
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
-0.5
-0.0
-0.1
0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.3
-0.1
0.1
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.4
-0.6
-0.1
-0.1
0.2
auxotrophy
YNB Glucose
0.1
0.1
0.2
-0.2
0.1
growth on ypd
YPD
-0.1
0.1
-0.1
0.2
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
-0.3
0.3
0.3
-0.0
auxotrophy
YNB Glucose 75mM Arginine
0.2
0.3
0.4
-0.2
-0.1
growth on oleic acid
YNB Oleic Acid
0.6
0.0
0.1
-0.1
0.1
auxotrophy
Dropout Complete
0.4
0.4
0.2
-0.2
0.0
growth on oleic acid
YNB Glucose
0.5
0.2
0.3
-0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.9
0.1
0.1
-0.0
-0.1
ypd buoyancy
40 hrs Median Buoyancy
0.6
0.1
0.3
0.0
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
1.3
0.2
0.2
-0.0
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
1.6
0.3
-0.1
0.1
-0.4
ypd buoyancy
40 hrs Low Buoyancy
1.0
0.1
0.6
-0.0
0.1
growth on ricinoleic acid
YNB Glucose
1.8
0.1
0.5
-0.0
-0.3
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