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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6453: 14821 - K03801 lipB lipoyl(octanoyl) transferase, at 827236 to 828223
14821
mRNA_6454: 14822 - BLAST putative nucleoporin-interacting protein NIC96 [Rhizo..., at 828916 to 829758
14822
mRNA_6455: 14823 - KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins, at 829918 to 832599
14823
mRNA_6456: 14824 - KOG3386 Copper transporter, at 832963 to 833757
14824
mRNA_6457: 14825 - Hypothetical Protein, at 833906 to 834580
14825
Group
Condition
mRNA_6453
mRNA_6454
mRNA_6455
mRNA_6456
mRNA_6457
14821
14822
14823
14824
14825
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
-0.6
-1.0
growth on oleic acid
YNB Glucose
-0.1
-1.4
0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-1.7
0.7
facs on lipid accumulation
Sorted High BODIPY Gate
-0.7
-0.0
-0.3
auxotrophy
YNB Glucose
-0.1
-0.8
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.3
-0.7
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.8
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.6
-0.8
0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
-0.3
-0.7
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.0
0.1
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
-0.4
-0.5
auxotrophy
Dropout Complete
0.0
-0.5
-0.1
growth on ypd
YPD
0.1
-0.6
0.1
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.0
0.0
growth on ricinoleic acid
YNB Glucose
-0.1
-0.1
0.2
growth on oleic acid
YNB Oleic Acid
0.3
-0.6
0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.3
0.6
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.0
1.2
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
0.5
0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.4
0.0
1.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.4
0.1
1.1
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