Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6453: 14821 - K03801 lipB lipoyl(octanoyl) transferase, at 827236 to 828223 14821 mRNA_6454: 14822 - BLAST putative nucleoporin-interacting protein NIC96 [Rhizo..., at 828916 to 829758 14822 mRNA_6455: 14823 - KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins, at 829918 to 832599 14823 mRNA_6456: 14824 - KOG3386 Copper transporter, at 832963 to 833757 14824 mRNA_6457: 14825 - Hypothetical Protein, at 833906 to 834580 14825
Group Condition mRNA_6453 mRNA_6454 mRNA_6455 mRNA_6456 mRNA_6457
14821
14822
14823
14824
14825
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation     0.1 -0.6 -1.0
growth on oleic acid YNB Glucose     -0.1 -1.4 0.1
auxotrophy YNB Glucose 75mM Methionine     -0.1 -1.7 0.7
facs on lipid accumulation Sorted High BODIPY Gate     -0.7 -0.0 -0.3
auxotrophy YNB Glucose     -0.1 -0.8 -0.1
auxotrophy YNB Glucose 75mM Arginine     -0.3 -0.7 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid     -0.1 -0.8 0.0
facs on lipid accumulation Sorted No BODIPY Gate     -0.6 -0.8 0.5
growth on ricinoleic acid YNB Ricinoleic Acid     0.1 -0.3 -0.7
facs on lipid accumulation Sorted Low BODIPY Gate     -1.0 0.1 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy     0.2 -0.4 -0.5
auxotrophy Dropout Complete     0.0 -0.5 -0.1
growth on ypd YPD     0.1 -0.6 0.1
ypd buoyancy 40 hrs High Buoyancy     -0.3 -0.0 0.0
growth on ricinoleic acid YNB Glucose     -0.1 -0.1 0.2
growth on oleic acid YNB Oleic Acid     0.3 -0.6 0.4
ypd buoyancy 40 hrs Low Buoyancy     -0.1 -0.3 0.6
ypd buoyancy 40 hrs Median Buoyancy     -0.1 -0.0 1.2
ypd buoyancy 40 hrs No Buoyancy Separation     0.1 0.5 0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy     0.4 0.0 1.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy     0.4 0.1 1.1
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