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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6449: 14817 - HMMPfam-Protein of unknown function (DUF1399)-PF07173, at 818867 to 821319
14817
mRNA_6450: 14818 - Hypothetical Protein, at 821969 to 822682
14818
mRNA_6451: 14819 - Hypothetical Protein, at 823535 to 824941
14819
mRNA_6452: 14820 - Hypothetical Protein, at 825555 to 826689
14820
mRNA_6453: 14821 - K03801 lipB lipoyl(octanoyl) transferase, at 827236 to 828223
14821
Group
Condition
mRNA_6449
mRNA_6450
mRNA_6451
mRNA_6452
mRNA_6453
14817
14818
14819
14820
14821
growth on ricinoleic acid
YNB Glucose
-0.2
-0.4
-0.6
0.2
growth on oleic acid
YNB Glucose
-0.3
-0.3
-0.0
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.3
-0.3
0.2
auxotrophy
YNB Glucose
0.1
-0.3
-0.5
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
-0.1
-0.3
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
0.1
-0.4
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.1
-0.5
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.3
-0.2
0.0
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
-0.2
0.3
-0.0
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.2
-0.0
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
0.3
-0.2
0.0
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.3
0.2
0.2
growth on ypd
YPD
0.3
0.0
-0.1
-0.0
ypd buoyancy
40 hrs Low Buoyancy
0.0
0.2
-0.1
0.0
growth on oleic acid
YNB Oleic Acid
0.0
0.2
0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.1
-0.1
0.3
auxotrophy
YNB Glucose 75mM Arginine
0.1
0.1
-0.1
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
0.2
-0.1
0.1
auxotrophy
Dropout Complete
-0.0
0.1
-0.1
0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
0.2
-0.1
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.0
0.6
-0.1
0.2
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