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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6426: 14794 - ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 770724 to 773097
14794
mRNA_6427: 14795 - KOG0516 Dystonin, GAS (Growth-arrest-specific protein), and related proteins, at 773204 to 778326
14795
mRNA_6428: 14796 - KOG2208 Vigilin, at 779181 to 783068
14796
mRNA_6429: 14797 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 784165 to 784634
14797
mRNA_6430: 14798 - KOG3112 Uncharacterized conserved protein, at 785004 to 786145
14798
Group
Condition
mRNA_6426
mRNA_6427
mRNA_6428
mRNA_6429
mRNA_6430
14794
14795
14796
14797
14798
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.4
-1.3
0.6
auxotrophy
YNB Glucose 75mM Arginine
0.2
-0.0
-0.6
-0.5
growth on ricinoleic acid
YNB Glucose
-0.1
-0.3
0.1
-0.2
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.2
0.1
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
0.2
-0.7
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
0.2
-0.3
-0.1
auxotrophy
YNB Glucose
-0.0
0.1
-0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.0
-0.4
0.3
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.3
0.1
0.1
growth on oleic acid
YNB Glucose
0.0
0.1
-0.1
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
0.0
0.2
0.2
-0.2
growth on oleic acid
YNB Oleic Acid
0.1
0.4
-0.5
0.3
auxotrophy
Dropout Complete
0.2
0.3
0.2
-0.5
ypd buoyancy
40 hrs High Buoyancy
0.1
0.0
-0.1
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.0
-0.1
-0.3
0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
0.7
-0.7
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
0.1
0.3
0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
0.3
0.6
-0.0
growth on ypd
YPD
0.1
-0.1
1.1
0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
0.4
0.9
0.6
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
0.6
1.8
-0.3
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