Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6387: 14755 - Hypothetical Protein, at 692168 to 693043 14755 mRNA_6388: 14756 - HMMPfam-BRCA1 C Terminus (BRCT) domain-PF00533,ProSiteProfiles-BRCT domain profile.-PS50172,SUPERFAMILY--SSF52113, at 693931 to 695622 14756 mRNA_6389: 14757 - HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Protein kinases ATP-binding region signature.-PS00107,ProSitePatterns-Serine/Threonine protein kinases active-site signature.-PS00108,ProSiteProfiles-Protein kinase domain profile.-PS50011,SMART-Serine/Threonine protein kinases, catalytic domain-SM00220,SUPERFAMILY--SSF56112, at 695999 to 699737 14757 mRNA_6390: 14758 - KOG0605 NDR and related serine/threonine kinases, at 700093 to 702768 14758 mRNA_6391: 14759 - K11558 SPC25 kinetochore protein Spc25, fungi type, at 703193 to 704324 14759
Group Condition mRNA_6387 mRNA_6388 mRNA_6389 mRNA_6390 mRNA_6391
14755
14756
14757
14758
14759
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.3 0.1 -0.5  
ypd buoyancy 40 hrs No Buoyancy Separation 0.5 -0.7 -0.2 -0.3  
growth on ypd YPD -0.3 -0.5 0.0 0.1  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.2 0.3 -0.4  
auxotrophy YNB Glucose 75mM Methionine -0.9 0.2 0.3 0.1  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.1 0.4 -0.6  
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.1 -0.0 -0.2  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.4 -0.3 0.1 -0.3  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.7 0.3 0.2 0.2  
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.0 -0.0 -0.1  
growth on ricinoleic acid YNB Glucose -0.3 0.1 0.2 0.0  
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.1 0.1 -0.3  
auxotrophy YNB Glucose -0.7 0.3 0.2 0.3  
auxotrophy Dropout Complete -0.6 0.2 0.4 0.2  
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.0 0.4 0.2  
growth on oleic acid YNB Glucose -0.3 0.3 0.2 0.1  
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 0.2 0.2 0.4  
facs on lipid accumulation Sorted No BODIPY Gate 0.4 -0.2 0.1 0.2  
facs on lipid accumulation Sorted High BODIPY Gate 0.9 -0.2 -0.2 0.1  
growth on oleic acid YNB Oleic Acid -0.2 0.3 0.3 0.3  
facs on lipid accumulation Sorted Low BODIPY Gate 0.6 -0.2 -0.2 0.5  
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