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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6387: 14755 - Hypothetical Protein, at 692168 to 693043
14755
mRNA_6388: 14756 - HMMPfam-BRCA1 C Terminus (BRCT) domain-PF00533,ProSiteProfiles-BRCT domain profile.-PS50172,SUPERFAMILY--SSF52113, at 693931 to 695622
14756
mRNA_6389: 14757 - HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Protein kinases ATP-binding region signature.-PS00107,ProSitePatterns-Serine/Threonine protein kinases active-site signature.-PS00108,ProSiteProfiles-Protein kinase domain profile.-PS50011,SMART-Serine/Threonine protein kinases, catalytic domain-SM00220,SUPERFAMILY--SSF56112, at 695999 to 699737
14757
mRNA_6390: 14758 - KOG0605 NDR and related serine/threonine kinases, at 700093 to 702768
14758
mRNA_6391: 14759 - K11558 SPC25 kinetochore protein Spc25, fungi type, at 703193 to 704324
14759
Group
Condition
mRNA_6387
mRNA_6388
mRNA_6389
mRNA_6390
mRNA_6391
14755
14756
14757
14758
14759
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.3
0.1
-0.5
ypd buoyancy
40 hrs No Buoyancy Separation
0.5
-0.7
-0.2
-0.3
growth on ypd
YPD
-0.3
-0.5
0.0
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.2
0.3
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.9
0.2
0.3
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.1
0.4
-0.6
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.1
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.4
-0.3
0.1
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.7
0.3
0.2
0.2
ypd buoyancy
40 hrs Low Buoyancy
0.2
-0.0
-0.0
-0.1
growth on ricinoleic acid
YNB Glucose
-0.3
0.1
0.2
0.0
ypd buoyancy
40 hrs Median Buoyancy
0.2
0.1
0.1
-0.3
auxotrophy
YNB Glucose
-0.7
0.3
0.2
0.3
auxotrophy
Dropout Complete
-0.6
0.2
0.4
0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.5
-0.0
0.4
0.2
growth on oleic acid
YNB Glucose
-0.3
0.3
0.2
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
0.2
0.2
0.4
facs on lipid accumulation
Sorted No BODIPY Gate
0.4
-0.2
0.1
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.9
-0.2
-0.2
0.1
growth on oleic acid
YNB Oleic Acid
-0.2
0.3
0.3
0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
0.6
-0.2
-0.2
0.5
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