Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6385: 14753 - K03107 SRP68 signal recognition particle subunit SRP68, at 687746 to 690070 14753 mRNA_6386: 14754 - KOG3043 Predicted hydrolase related to dienelactone hydrolase, at 690611 to 691768 14754 mRNA_6387: 14755 - Hypothetical Protein, at 692168 to 693043 14755 mRNA_6388: 14756 - HMMPfam-BRCA1 C Terminus (BRCT) domain-PF00533,ProSiteProfiles-BRCT domain profile.-PS50172,SUPERFAMILY--SSF52113, at 693931 to 695622 14756 mRNA_6389: 14757 - HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Protein kinases ATP-binding region signature.-PS00107,ProSitePatterns-Serine/Threonine protein kinases active-site signature.-PS00108,ProSiteProfiles-Protein kinase domain profile.-PS50011,SMART-Serine/Threonine protein kinases, catalytic domain-SM00220,SUPERFAMILY--SSF56112, at 695999 to 699737 14757
Group Condition mRNA_6385 mRNA_6386 mRNA_6387 mRNA_6388 mRNA_6389
14753
14754
14755
14756
14757
growth on ypd YPD -1.2 -0.7 -0.3 -0.5 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.3 -0.2 -0.2 -0.3 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.0 -0.5 -0.3 -0.2 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.7 -0.2 -0.0 -0.1 0.4
auxotrophy YNB Glucose -1.5 0.1 -0.7 0.3 0.2
auxotrophy YNB Glucose 75mM Methionine -1.2 0.1 -0.9 0.2 0.3
growth on oleic acid YNB Glucose -1.2 -0.4 -0.3 0.3 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.9 -0.3 -0.7 0.3 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.3 -0.1 0.4 -0.3 0.1
auxotrophy YNB Glucose 75mM Arginine -1.5 0.4 -0.5 -0.0 0.4
growth on ricinoleic acid YNB Glucose -0.9 -0.1 -0.3 0.1 0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -0.4 0.4 -0.2 0.1
auxotrophy Dropout Complete -0.7 0.3 -0.6 0.2 0.4
growth on oleic acid YNB Oleic Acid -0.3 -0.4 -0.2 0.3 0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.2 -0.4 0.2 0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 -0.7 0.6 -0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 0.0 -0.0 -0.1 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation 1.5 -1.1 0.5 -0.7 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.3 -0.3 0.2 -0.0 -0.0
ypd buoyancy 40 hrs Median Buoyancy 0.8 -0.4 0.2 0.1 0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.9 0.4 0.9 -0.2 -0.2
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