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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6380: 14748 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 678421 to 679401
14748
mRNA_6381: 14749 - Interpro F-box-like, at 679604 to 681699
14749
mRNA_6382: 14750 - Hypothetical Protein, at 682281 to 684206
14750
mRNA_6383: 14751 - Hypothetical Protein, at 684647 to 685455
14751
mRNA_6384: 14752 - K13201 TIA1, TIAL1 nucleolysin TIA-1/TIAR, at 685747 to 687315
14752
Group
Condition
mRNA_6380
mRNA_6381
mRNA_6382
mRNA_6383
mRNA_6384
14748
14749
14750
14751
14752
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.7
-0.5
0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.5
-0.0
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.7
-0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.0
0.3
0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
-0.5
0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
-0.2
0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
0.1
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.2
0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
0.0
0.1
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
0.1
-0.4
auxotrophy
Dropout Complete
-0.1
-0.1
-0.2
growth on ypd
YPD
-0.1
-0.1
-0.1
auxotrophy
YNB Glucose
-0.0
-0.1
-0.1
growth on ricinoleic acid
YNB Glucose
-0.0
0.2
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.3
0.3
0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.3
0.1
ypd buoyancy
40 hrs Low Buoyancy
0.2
0.1
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
-0.0
0.4
growth on oleic acid
YNB Oleic Acid
0.0
0.4
0.0
growth on oleic acid
YNB Glucose
-0.2
0.5
0.2
ypd buoyancy
40 hrs No Buoyancy Separation
0.6
0.3
-0.1
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