Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6359: 14727 - KOG1812 Predicted E3 ubiquitin ligase, at 630775 to 633081 14727 mRNA_6360: 14728 - K17790 TIM22 mitochondrial import inner membrane translocase subunit TIM22, at 633743 to 634504 14728 mRNA_6361: 14729 - K08832 SRPK3, STK23 serine/threonine-protein kinase SRPK3, at 635268 to 638035 14729 mRNA_6362: 14730 - SMART-Cytochrome b-561 / ferric reductase transmembrane domain.-SM00665, at 638595 to 641031 14730 mRNA_6363: 14731 - K14553 UTP18 U3 small nucleolar RNA-associated protein 18, at 641098 to 643745 14731
Group Condition mRNA_6359 mRNA_6360 mRNA_6361 mRNA_6362 mRNA_6363
14727
14728
14729
14730
14731
facs on lipid accumulation Sorted Low BODIPY Gate -0.2     -0.4 -1.0
facs on lipid accumulation Sorted High BODIPY Gate -0.3     -0.6 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1     -0.3 -0.4
ypd buoyancy 40 hrs High Buoyancy 0.1     0.1 -0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1     -0.0 -0.3
auxotrophy YNB Glucose 75mM Methionine 0.4     -0.3 -0.5
ypd buoyancy 40 hrs Median Buoyancy 0.1     0.1 -0.3
auxotrophy Dropout Complete 0.3     -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1     -0.1 0.2
growth on oleic acid YNB Oleic Acid 0.1     0.2 -0.3
growth on ypd YPD 0.1     0.0 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.0     0.4 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0     0.4 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.1     0.1 0.1
ypd buoyancy 40 hrs Low Buoyancy 0.3     0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2     0.1 0.4
growth on ricinoleic acid YNB Glucose 0.0     0.2 0.2
growth on oleic acid YNB Glucose 0.2     -0.2 0.5
auxotrophy YNB Glucose 75mM Arginine 0.2     -0.1 0.4
auxotrophy YNB Glucose 0.3     0.3 0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2     0.5 0.5
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