Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6356: 14724 - K01477 alc, ALLC allantoicase, at 622458 to 625058 14724 mRNA_6357: 14725 - HMMPfam-Ribonuclease-III-like-PF14622,SMART-Ribonuclease III family-SM00535,SUPERFAMILY--SSF69065, at 625367 to 626592 14725 mRNA_6358: 14726 - KOG1674 Cyclin, at 627075 to 629360 14726 mRNA_6359: 14727 - KOG1812 Predicted E3 ubiquitin ligase, at 630775 to 633081 14727 mRNA_6360: 14728 - K17790 TIM22 mitochondrial import inner membrane translocase subunit TIM22, at 633743 to 634504 14728
Group Condition mRNA_6356 mRNA_6357 mRNA_6358 mRNA_6359 mRNA_6360
14724
14725
14726
14727
14728
facs on lipid accumulation Sorted High BODIPY Gate -4.0   -0.7 -0.3  
facs on lipid accumulation Sorted Low BODIPY Gate -3.2   0.1 -0.2  
facs on lipid accumulation Sorted No BODIPY Gate -2.4   0.2 -0.1  
growth on ricinoleic acid YNB Ricinoleic Acid -0.7   -1.0 -0.0  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.8   -0.4 0.2  
growth on oleic acid YNB Oleic Acid -0.6   -0.3 0.1  
growth on oleic acid YNB Glucose -0.4   -0.3 0.2  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4   0.1 -0.1  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1   -0.2 0.0  
growth on ricinoleic acid YNB Glucose -0.0   -0.2 0.0  
ypd buoyancy 40 hrs Low Buoyancy -0.1   -0.3 0.3  
auxotrophy YNB Glucose 75mM Arginine -0.3   -0.0 0.2  
auxotrophy Dropout Complete -0.4   0.0 0.3  
auxotrophy YNB Glucose -0.4   0.1 0.3  
ypd buoyancy 40 hrs No Buoyancy Separation 0.1   0.0 0.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2   0.2 -0.2  
ypd buoyancy 40 hrs High Buoyancy 0.1   -0.0 0.1  
ypd buoyancy 40 hrs Median Buoyancy 0.3   -0.1 0.1  
growth on ypd YPD 0.1   0.3 0.1  
auxotrophy YNB Glucose 75mM Methionine -0.2   0.3 0.4  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.5   0.1 -0.1  
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