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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6345: 14713 - HMMPfam-START domain-PF01852,ProSiteProfiles-START domain profile.-PS50848,SUPERFAMILY--SSF55961, at 596038 to 599020
14713
mRNA_6346: 14714 - HMMPfam-Protein of unknown function (DUF938)-PF06080,SUPERFAMILY--SSF53335, at 599677 to 600627
14714
mRNA_6347: 14715 - Hypothetical Protein, at 601204 to 601756
14715
mRNA_6348: 14716 - K11373 ELP1, IKI3, IKBKAP elongator complex protein 1, at 601835 to 607122
14716
mRNA_6349: 14717 - BLAST NADH dehydrogenase [ubiquinone] 1 beta subcomplex..., at 607266 to 607793
14717
Group
Condition
mRNA_6345
mRNA_6346
mRNA_6347
mRNA_6348
mRNA_6349
14713
14714
14715
14716
14717
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.5
-0.1
-1.3
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.2
-0.5
-0.9
ypd buoyancy
40 hrs No Buoyancy Separation
0.5
-1.0
-0.8
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
-0.1
-0.1
-0.5
ypd buoyancy
40 hrs Median Buoyancy
-0.3
-0.2
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.5
-0.3
0.3
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.7
0.0
0.4
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
-0.1
0.5
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
-0.1
-0.4
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.6
0.1
0.4
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.1
-0.1
0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
-0.3
0.3
-0.1
growth on ricinoleic acid
YNB Glucose
0.4
-0.2
0.1
-0.3
growth on oleic acid
YNB Glucose
-0.1
0.2
0.1
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
-0.1
0.6
0.3
growth on ypd
YPD
0.3
0.2
0.6
-0.2
growth on oleic acid
YNB Oleic Acid
-0.1
0.2
0.9
0.2
auxotrophy
YNB Glucose 75mM Arginine
0.4
0.5
0.3
0.2
auxotrophy
YNB Glucose
0.4
0.4
0.6
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.6
0.8
0.5
-0.1
auxotrophy
Dropout Complete
0.3
0.9
0.6
0.4
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