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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6341: 14709 - K01867 WARS, trpS tryptophanyl-tRNA synthetase, at 587053 to 588639
14709
mRNA_6342: 14710 - KOG0756 Mitochondrial tricarboxylate/dicarboxylate carrier proteins, at 588897 to 590459
14710
mRNA_6343: 14711 - K12621 LSM2 U6 snRNA-associated Sm-like protein LSm2, at 590850 to 591445
14711
mRNA_6344: 14712 - KOG3525 Subtilisin-like proprotein convertase, at 592028 to 595751
14712
mRNA_6345: 14713 - HMMPfam-START domain-PF01852,ProSiteProfiles-START domain profile.-PS50848,SUPERFAMILY--SSF55961, at 596038 to 599020
14713
Group
Condition
mRNA_6341
mRNA_6342
mRNA_6343
mRNA_6344
mRNA_6345
14709
14710
14711
14712
14713
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.4
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.3
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
-0.3
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.7
-0.3
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.2
-0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
-0.3
-0.7
growth on oleic acid
YNB Oleic Acid
-0.5
-0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.1
-0.3
growth on oleic acid
YNB Glucose
-0.4
-0.2
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.1
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
0.0
-0.5
growth on ypd
YPD
-0.5
-0.0
0.3
ypd buoyancy
40 hrs High Buoyancy
-0.2
0.2
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
0.1
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.2
0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.4
0.2
0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
0.2
0.5
auxotrophy
Dropout Complete
-0.0
0.2
0.3
auxotrophy
YNB Glucose
-0.2
0.3
0.4
growth on ricinoleic acid
YNB Glucose
-0.1
0.3
0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.2
0.5
0.6
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