Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6313: 14681 - K10592 HUWE1, MULE, ARF-BP1 E3 ubiquitin-protein ligase HUWE1, at 512417 to 524941 14681 mRNA_6314: 14682 - K11426 SMYD SET and MYND domain-containing protein, at 525320 to 527665 14682 mRNA_6315: 14683 - K10609 CUL4 cullin 4, at 528215 to 531333 14683 mRNA_6316: 14684 - Hypothetical Protein, at 531577 to 532542 14684 mRNA_6317: 14685 - K11649 SMARCC SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C, at 532881 to 534866 14685
Group Condition mRNA_6313 mRNA_6314 mRNA_6315 mRNA_6316 mRNA_6317
14681
14682
14683
14684
14685
ypd buoyancy 40 hrs No Buoyancy Separation   -0.5 -1.4 -0.3  
ypd buoyancy 40 hrs Low Buoyancy   -0.2 -0.7 -0.3  
growth on ricinoleic acid YNB Ricinoleic Acid   -0.0 -1.2 0.2  
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.2 -1.1 0.2  
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.4 -0.7 0.1  
growth on ricinoleic acid YNB Glucose   -0.0 -1.1 0.1  
ypd buoyancy 40 hrs High Buoyancy   -0.1 -0.6 -0.2  
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.2 -0.6 0.0  
auxotrophy YNB Glucose   0.1 -0.9 0.1  
auxotrophy YNB Glucose 75mM Arginine   0.4 -1.0 0.1  
ypd buoyancy 40 hrs Median Buoyancy   -0.1 -0.2 -0.1  
facs on lipid accumulation Sorted Low BODIPY Gate   -0.2 -0.2 -0.0  
facs on lipid accumulation Sorted High BODIPY Gate   0.2 -0.6 -0.0  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.2 -0.2 0.1  
auxotrophy YNB Glucose 75mM Methionine   0.1 -0.5 0.2  
facs on lipid accumulation Sorted No BODIPY Gate   0.1 -0.4 0.2  
auxotrophy Dropout Complete   -0.0 -0.3 0.3  
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.1 -0.2 0.2  
growth on oleic acid YNB Oleic Acid   0.1 0.1 0.1  
growth on oleic acid YNB Glucose   0.1 0.2 0.2  
growth on ypd YPD   0.4 0.5 0.3  
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