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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6311: 14679 - K03514 PAPD5_7, TRF4 non-canonical poly(A) RNA polymerase PAPD5/7, at 505082 to 507881
14679
mRNA_6312: 14680 - K10754 RFC1 replication factor C subunit 1, at 508348 to 511991
14680
mRNA_6313: 14681 - K10592 HUWE1, MULE, ARF-BP1 E3 ubiquitin-protein ligase HUWE1, at 512417 to 524941
14681
mRNA_6314: 14682 - K11426 SMYD SET and MYND domain-containing protein, at 525320 to 527665
14682
mRNA_6315: 14683 - K10609 CUL4 cullin 4, at 528215 to 531333
14683
Group
Condition
mRNA_6311
mRNA_6312
mRNA_6313
mRNA_6314
mRNA_6315
14679
14680
14681
14682
14683
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
-0.4
-0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
-0.0
-1.2
ypd buoyancy
40 hrs No Buoyancy Separation
0.9
-0.5
-1.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.2
-0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
-0.2
-0.2
growth on ricinoleic acid
YNB Glucose
0.3
-0.0
-1.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.5
-0.2
-1.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
0.1
-0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.1
0.4
-1.0
auxotrophy
YNB Glucose
0.2
0.1
-0.9
ypd buoyancy
40 hrs Low Buoyancy
0.3
-0.2
-0.7
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
0.2
-0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Methionine
0.1
0.1
-0.5
ypd buoyancy
40 hrs High Buoyancy
0.3
-0.1
-0.6
auxotrophy
Dropout Complete
0.3
-0.0
-0.3
ypd buoyancy
40 hrs Median Buoyancy
0.2
-0.1
-0.2
growth on oleic acid
YNB Glucose
-0.3
0.1
0.2
growth on oleic acid
YNB Oleic Acid
0.1
0.1
0.1
growth on ypd
YPD
-0.0
0.4
0.5
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