Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6311: 14679 - K03514 PAPD5_7, TRF4 non-canonical poly(A) RNA polymerase PAPD5/7, at 505082 to 507881 14679 mRNA_6312: 14680 - K10754 RFC1 replication factor C subunit 1, at 508348 to 511991 14680 mRNA_6313: 14681 - K10592 HUWE1, MULE, ARF-BP1 E3 ubiquitin-protein ligase HUWE1, at 512417 to 524941 14681 mRNA_6314: 14682 - K11426 SMYD SET and MYND domain-containing protein, at 525320 to 527665 14682 mRNA_6315: 14683 - K10609 CUL4 cullin 4, at 528215 to 531333 14683
Group Condition mRNA_6311 mRNA_6312 mRNA_6313 mRNA_6314 mRNA_6315
14679
14680
14681
14682
14683
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4     -0.4 -0.7
growth on ricinoleic acid YNB Ricinoleic Acid 0.3     -0.0 -1.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.9     -0.5 -1.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.6     -0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1     -0.2 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4     -0.2 -0.2
growth on ricinoleic acid YNB Glucose 0.3     -0.0 -1.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.5     -0.2 -1.1
facs on lipid accumulation Sorted No BODIPY Gate -0.3     0.1 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.1     0.4 -1.0
auxotrophy YNB Glucose 0.2     0.1 -0.9
ypd buoyancy 40 hrs Low Buoyancy 0.3     -0.2 -0.7
facs on lipid accumulation Sorted High BODIPY Gate -0.2     0.2 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1     -0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine 0.1     0.1 -0.5
ypd buoyancy 40 hrs High Buoyancy 0.3     -0.1 -0.6
auxotrophy Dropout Complete 0.3     -0.0 -0.3
ypd buoyancy 40 hrs Median Buoyancy 0.2     -0.1 -0.2
growth on oleic acid YNB Glucose -0.3     0.1 0.2
growth on oleic acid YNB Oleic Acid 0.1     0.1 0.1
growth on ypd YPD -0.0     0.4 0.5
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