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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6308: 14676 - K09326 OTX1 homeobox protein OTX1, at 499751 to 502382
14676
mRNA_6309: 14677 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 502808 to 503552
14677
mRNA_6310: 14678 - Hypothetical Protein, at 504163 to 504987
14678
mRNA_6311: 14679 - K03514 PAPD5_7, TRF4 non-canonical poly(A) RNA polymerase PAPD5/7, at 505082 to 507881
14679
mRNA_6312: 14680 - K10754 RFC1 replication factor C subunit 1, at 508348 to 511991
14680
Group
Condition
mRNA_6308
mRNA_6309
mRNA_6310
mRNA_6311
mRNA_6312
14676
14677
14678
14679
14680
facs on lipid accumulation
Sorted High BODIPY Gate
-1.6
-0.4
-3.1
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-1.0
-0.5
-1.8
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
-0.1
-3.6
0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-1.1
-2.7
0.9
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.7
0.2
-1.5
0.5
growth on oleic acid
YNB Glucose
-0.2
-0.1
-0.6
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
-0.3
-0.5
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
1.2
-0.3
-1.2
-0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.1
-1.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.4
-0.4
-0.4
0.3
growth on ypd
YPD
0.5
-0.5
-0.7
-0.0
growth on ricinoleic acid
YNB Glucose
-0.8
-0.2
0.1
0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.3
-0.5
0.2
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.0
-0.5
0.3
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.4
0.0
0.1
auxotrophy
Dropout Complete
-0.4
-0.2
0.2
0.3
growth on oleic acid
YNB Oleic Acid
0.2
-0.0
-0.5
0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.4
-0.3
0.9
-0.1
ypd buoyancy
40 hrs Median Buoyancy
0.3
-0.2
-0.1
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
-0.4
1.0
-0.1
auxotrophy
YNB Glucose
0.1
-0.1
0.8
0.2
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