Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6307: 14675 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 494501 to 498811 14675 mRNA_6308: 14676 - K09326 OTX1 homeobox protein OTX1, at 499751 to 502382 14676 mRNA_6309: 14677 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 502808 to 503552 14677 mRNA_6310: 14678 - Hypothetical Protein, at 504163 to 504987 14678 mRNA_6311: 14679 - K03514 PAPD5_7, TRF4 non-canonical poly(A) RNA polymerase PAPD5/7, at 505082 to 507881 14679
Group Condition mRNA_6307 mRNA_6308 mRNA_6309 mRNA_6310 mRNA_6311
14675
14676
14677
14678
14679
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -1.6 -0.4 -3.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -1.0 -0.5 -1.8 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 0.2 -0.1 -3.6 0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 -0.1 -1.1 -2.7 0.9
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 -0.7 0.2 -1.5 0.5
growth on oleic acid YNB Glucose -0.0 -0.2 -0.1 -0.6 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 0.0 -0.3 -0.5 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.1 0.1 -1.1 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.4 -0.4 -0.4 0.3
facs on lipid accumulation Sorted Low BODIPY Gate 0.4 1.2 -0.3 -1.2 -0.6
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.0 -0.0 -0.5 0.3
growth on ricinoleic acid YNB Glucose 0.1 -0.8 -0.2 0.1 0.3
growth on ypd YPD 0.4 0.5 -0.5 -0.7 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 0.3 -0.5 0.2 -0.4
auxotrophy YNB Glucose 75mM Methionine 0.1 0.1 -0.4 0.0 0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.4 -0.3 0.9 -0.1
auxotrophy Dropout Complete 0.3 -0.4 -0.2 0.2 0.3
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.3 -0.2 -0.1 0.2
growth on oleic acid YNB Oleic Acid 0.3 0.2 -0.0 -0.5 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.3 -0.4 1.0 -0.1
auxotrophy YNB Glucose 0.2 0.1 -0.1 0.8 0.2
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