Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6303: 14671 - HMMPfam-Uncharacterised protein family UPF0052-PF01933,SUPERFAMILY--SSF142338, at 480428 to 482328 14671 mRNA_6304: 14672 - Hypothetical Protein, at 482643 to 484084 14672 mRNA_6305: 14673 - HMMPfam-FAM72 protein-PF14976,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028, at 485457 to 486370 14673 mRNA_6306: 14674 - K05727 DOCK3 dedicator of cytokinesis protein 3, at 487533 to 494216 14674 mRNA_6307: 14675 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 494501 to 498811 14675
Group Condition mRNA_6303 mRNA_6304 mRNA_6305 mRNA_6306 mRNA_6307
14671
14672
14673
14674
14675
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.3 -0.6 -0.6 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 0.1 -2.2 0.1 0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 0.3 -0.9 -0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.3 0.2 -0.8 0.1 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 0.3 -0.4 -0.0 0.3
growth on ricinoleic acid YNB Glucose 0.1 0.2 -0.5 0.0 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.2 0.0 -0.2 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.3 0.5 -0.2 -0.1
growth on ypd YPD -0.1 0.4 -0.5 0.1 0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 0.6 -0.2 -0.2 0.0
ypd buoyancy 40 hrs High Buoyancy 0.4 0.1 0.5 -0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.0 1.0 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.5 0.3 -0.2 0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.5 -0.1 0.0 0.2
growth on oleic acid YNB Glucose 0.1 0.5 0.5 -0.2 -0.0
auxotrophy Dropout Complete 0.1 0.3 0.7 -0.2 0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.5 0.0 0.5 0.1 0.1
auxotrophy YNB Glucose 0.1 0.8 0.3 -0.1 0.2
auxotrophy YNB Glucose 75mM Arginine 0.1 1.0 0.5 -0.1 -0.1
growth on oleic acid YNB Oleic Acid 0.2 0.5 0.5 -0.0 0.3
auxotrophy YNB Glucose 75mM Methionine 0.4 0.8 0.8 0.0 0.1
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