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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6301: 14669 - Hypothetical Protein, at 477097 to 477785
14669
mRNA_6302: 14670 - K12562 AMPH amphiphysin, at 478198 to 480170
14670
mRNA_6303: 14671 - HMMPfam-Uncharacterised protein family UPF0052-PF01933,SUPERFAMILY--SSF142338, at 480428 to 482328
14671
mRNA_6304: 14672 - Hypothetical Protein, at 482643 to 484084
14672
mRNA_6305: 14673 - HMMPfam-FAM72 protein-PF14976,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028, at 485457 to 486370
14673
Group
Condition
mRNA_6301
mRNA_6302
mRNA_6303
mRNA_6304
mRNA_6305
14669
14670
14671
14672
14673
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
0.2
-0.2
0.1
-2.2
facs on lipid accumulation
Sorted High BODIPY Gate
1.1
-0.7
-0.2
-0.3
-0.6
growth on ypd
YPD
-0.4
0.2
-0.1
0.4
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
0.5
-0.1
-0.3
0.2
-0.8
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.7
0.1
-0.5
0.3
-0.9
growth on ricinoleic acid
YNB Glucose
0.2
-0.3
0.1
0.2
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
0.4
-0.3
0.2
-0.3
0.5
ypd buoyancy
40 hrs Median Buoyancy
0.6
-0.2
-0.0
0.2
0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.6
0.4
-0.4
0.3
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.4
-0.2
0.0
0.6
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
0.2
0.1
0.5
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.1
0.4
0.1
0.5
growth on oleic acid
YNB Glucose
-0.0
-0.1
0.1
0.5
0.5
growth on oleic acid
YNB Oleic Acid
-0.0
0.1
0.2
0.5
0.5
auxotrophy
YNB Glucose
0.2
-0.2
0.1
0.8
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.6
0.1
0.1
0.5
0.3
ypd buoyancy
40 hrs Low Buoyancy
0.3
0.4
0.1
-0.0
1.0
auxotrophy
YNB Glucose 75mM Arginine
0.4
-0.1
0.1
1.0
0.5
auxotrophy
Dropout Complete
1.1
-0.2
0.1
0.3
0.7
ypd buoyancy
40 hrs No Buoyancy Separation
1.2
0.0
0.5
0.0
0.5
auxotrophy
YNB Glucose 75mM Methionine
0.7
-0.0
0.4
0.8
0.8
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