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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6295: 14663 - K11593 ELF2C, AGO eukaryotic translation initiation factor 2C, at 463148 to 466558
14663
mRNA_6296: 14664 - Hypothetical Protein, at 466865 to 468121
14664
mRNA_6297: 14665 - K17970 MDV1, FIS2 mitochondrial division protein 1, at 469151 to 471840
14665
mRNA_6298: 14666 - K03842 ALG1 beta-1,4-mannosyltransferase, at 471993 to 473912
14666
mRNA_6299: 14667 - K14574 SDO1, SBDS ribosome maturation protein SDO1, at 473902 to 475228
14667
Group
Condition
mRNA_6295
mRNA_6296
mRNA_6297
mRNA_6298
mRNA_6299
14663
14664
14665
14666
14667
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.7
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.8
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.8
-0.5
0.1
growth on oleic acid
YNB Glucose
-0.6
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.7
-0.4
0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
0.4
-1.0
ypd buoyancy
40 hrs Low Buoyancy
0.4
-0.0
-1.0
growth on oleic acid
YNB Oleic Acid
-0.4
0.1
-0.3
growth on ypd
YPD
-0.1
-0.2
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.6
0.8
-0.7
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
0.6
-0.9
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.2
0.2
growth on ricinoleic acid
YNB Glucose
-0.2
0.3
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.3
0.3
ypd buoyancy
40 hrs Median Buoyancy
0.2
0.2
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.4
0.2
0.3
auxotrophy
YNB Glucose
-0.4
0.4
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
0.6
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
1.1
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.3
0.6
0.3
auxotrophy
Dropout Complete
-0.3
0.9
0.8
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