Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6290: 14658 - KOG0394 Ras-related GTPase, at 451269 to 452760 14658 mRNA_6291: 14659 - K12182 HGS, HRS, VPS27 hepatocyte growth factor-regulated tyrosine kinase substrate, at 453109 to 455308 14659 mRNA_6292: 14660 - K15082 RAD7 DNA repair protein RAD7, at 455485 to 457859 14660 mRNA_6293: 14661 - K18467 VPS29 vacuolar protein sorting-associated protein 29, at 458266 to 459644 14661 mRNA_6294: 14662 - K00928 lysC aspartate kinase, at 460272 to 462518 14662
Group Condition mRNA_6290 mRNA_6291 mRNA_6292 mRNA_6293 mRNA_6294
14658
14659
14660
14661
14662
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 -2.4 0.0 -3.8  
facs on lipid accumulation Sorted No BODIPY Gate 0.4 -1.2 -0.2 -0.9  
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.4 -0.1 -1.0  
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 0.4 -0.1 -1.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.1 0.2 -1.3  
growth on ypd YPD 0.2 0.2 0.3 -1.7  
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 0.2 -0.3 -0.3  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.4 -0.3 -0.1 -0.7  
growth on ricinoleic acid YNB Glucose -0.3 -0.1 -0.2 -0.1  
growth on oleic acid YNB Glucose -0.5 0.3 0.3 -0.3  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.4 -0.4 0.1 -0.3  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 0.1 -0.1 -0.4  
auxotrophy YNB Glucose 75mM Methionine -0.5 0.5 0.2 0.1  
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.2 0.0 -0.1  
auxotrophy YNB Glucose 75mM Arginine -0.1 0.4 0.3 -0.3  
auxotrophy YNB Glucose -0.1 0.5 -0.0 0.0  
ypd buoyancy 40 hrs High Buoyancy 0.1 0.1 0.2 0.1  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 0.5 0.1 0.2  
growth on oleic acid YNB Oleic Acid -0.5 0.5 0.3 0.2  
ypd buoyancy 40 hrs Low Buoyancy 0.0 0.5 0.3 -0.1  
auxotrophy Dropout Complete -0.0 1.1 -0.1 0.2  
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