Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6257: 14625 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 368702 to 371060 14625 mRNA_6258: 14626 - K01687 ilvD dihydroxy-acid dehydratase, at 371903 to 374480 14626 mRNA_6259: 14627 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 374998 to 377098 14627 mRNA_6260: 14628 - HMMPfam-Meiosis protein SPO22/ZIP4 like-PF08631, at 377562 to 381779 14628 mRNA_6261: 14629 - K09274 K09274 HMG box factor, other, at 383014 to 384624 14629
Group Condition mRNA_6257 mRNA_6258 mRNA_6259 mRNA_6260 mRNA_6261
14625
14626
14627
14628
14629
facs on lipid accumulation Sorted Low BODIPY Gate -1.1 -0.6 -1.9 0.1 -0.1
auxotrophy YNB Glucose -0.1 -0.2 -0.3 0.1 -0.3
growth on oleic acid YNB Glucose -0.3 -0.2 -0.4 0.3 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.2 0.0 -0.3 0.0 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.3 -0.7 0.0 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.2 -0.9 0.5 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.3 -0.3 0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.1 -0.1 0.2 -0.2
growth on ypd YPD 0.0 -0.0 -0.0 -0.1 -0.2
auxotrophy Dropout Complete -0.1 0.2 -0.2 -0.0 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.2 0.5 -0.2 0.1 -0.3
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.1 -0.1 0.2 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.0 0.2 -0.4 0.2 0.0
ypd buoyancy 40 hrs Low Buoyancy 0.3 -0.1 -0.1 0.2 -0.3
growth on oleic acid YNB Oleic Acid 0.1 -0.4 0.2 0.3 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.8 -0.2 -0.0 -0.0 0.1
growth on ricinoleic acid YNB Glucose 0.4 0.2 -0.4 0.2 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.5 -0.0 -0.1 -0.2 0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.6 0.2 0.4 -0.3 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.4 0.3 -0.0 0.2 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.6 0.1 0.1 0.3 0.4
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