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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6250: 14618 - Hypothetical Protein, at 355476 to 357206
14618
mRNA_6251: 14619 - KOG4188 Uncharacterized conserved protein, at 357602 to 358776
14619
mRNA_6252: 14620 - K10845 TTDA, GTF2H5, TFB5 TFIIH basal transcription factor complex TTD-A subunit, at 358832 to 359230
14620
mRNA_6253: 14621 - HMMPfam-FR47-like protein-PF08445,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 360247 to 361370
14621
mRNA_6254: 14622 - K20477 RGP1 RAB6A-GEF complex partner protein 2, at 361772 to 365441
14622
Group
Condition
mRNA_6250
mRNA_6251
mRNA_6252
mRNA_6253
mRNA_6254
14618
14619
14620
14621
14622
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
0.1
-3.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.2
-2.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
0.4
-1.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
-0.1
-1.1
growth on oleic acid
YNB Oleic Acid
-0.2
-0.4
-0.3
growth on oleic acid
YNB Glucose
0.2
-0.5
-0.2
auxotrophy
YNB Glucose 75mM Methionine
0.3
-0.0
-0.8
ypd buoyancy
40 hrs No Buoyancy Separation
0.0
-0.5
0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
-0.1
-0.6
auxotrophy
YNB Glucose 75mM Arginine
0.4
-0.2
-0.4
ypd buoyancy
40 hrs High Buoyancy
-0.2
0.1
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.3
-0.2
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.2
0.1
auxotrophy
YNB Glucose
0.5
0.0
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.9
0.1
-0.8
growth on ricinoleic acid
YNB Ricinoleic Acid
0.4
0.4
-0.6
growth on ypd
YPD
-0.1
0.2
0.1
auxotrophy
Dropout Complete
0.6
-0.2
0.0
ypd buoyancy
40 hrs Low Buoyancy
0.2
-0.1
0.5
growth on ricinoleic acid
YNB Glucose
0.8
0.4
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.5
-0.0
0.8
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