Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6242: 14610 - K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase, at 335352 to 337546 14610 mRNA_6243: 14611 - Hypothetical Protein, at 337932 to 340072 14611 mRNA_6244: 14612 - K07901 RAB8A, MEL Ras-related protein Rab-8A, at 340765 to 342148 14612 mRNA_6245: 14613 - HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,SUPERFAMILY--SSF51445, at 343220 to 344409 14613 mRNA_6246: 14614 - Hypothetical Protein, at 345803 to 347833 14614
Group Condition mRNA_6242 mRNA_6243 mRNA_6244 mRNA_6245 mRNA_6246
14610
14611
14612
14613
14614
growth on ricinoleic acid YNB Ricinoleic Acid -1.5 -0.5   -0.4 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -2.3 -0.1   0.2 0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 0.4   -1.2 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.3   -0.2 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.3   -0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.7 -0.1   0.2 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.4 0.1   -0.3 0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.2 0.4   -0.4 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.4   0.5 -0.3
growth on oleic acid YNB Oleic Acid -0.6 -0.2   0.6 -0.0
growth on ypd YPD 0.1 0.1   -0.2 -0.0
growth on oleic acid YNB Glucose -0.3 0.2   0.4 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.3   0.8 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.3   0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.2   0.7 -0.2
growth on ricinoleic acid YNB Glucose 0.1 0.1   0.1 0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.8 0.1   -0.1 -0.4
auxotrophy YNB Glucose 0.1 0.3   0.3 -0.0
auxotrophy Dropout Complete 0.2 0.2   0.2 0.1
auxotrophy YNB Glucose 75mM Methionine 0.2 0.1   0.5 0.1
auxotrophy YNB Glucose 75mM Arginine 0.1 0.3   0.5 -0.0
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