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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6242: 14610 - K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase, at 335352 to 337546
14610
mRNA_6243: 14611 - Hypothetical Protein, at 337932 to 340072
14611
mRNA_6244: 14612 - K07901 RAB8A, MEL Ras-related protein Rab-8A, at 340765 to 342148
14612
mRNA_6245: 14613 - HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,SUPERFAMILY--SSF51445, at 343220 to 344409
14613
mRNA_6246: 14614 - Hypothetical Protein, at 345803 to 347833
14614
Group
Condition
mRNA_6242
mRNA_6243
mRNA_6244
mRNA_6245
mRNA_6246
14610
14611
14612
14613
14614
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.5
-0.5
-0.4
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-2.3
-0.1
0.2
0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
0.4
-1.2
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.3
-0.2
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.3
-0.2
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.7
-0.1
0.2
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.4
0.1
-0.3
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
0.4
-0.4
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.4
0.5
-0.3
growth on oleic acid
YNB Oleic Acid
-0.6
-0.2
0.6
-0.0
growth on ypd
YPD
0.1
0.1
-0.2
-0.0
growth on oleic acid
YNB Glucose
-0.3
0.2
0.4
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.3
0.8
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.3
0.1
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.2
0.7
-0.2
growth on ricinoleic acid
YNB Glucose
0.1
0.1
0.1
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.8
0.1
-0.1
-0.4
auxotrophy
YNB Glucose
0.1
0.3
0.3
-0.0
auxotrophy
Dropout Complete
0.2
0.2
0.2
0.1
auxotrophy
YNB Glucose 75mM Methionine
0.2
0.1
0.5
0.1
auxotrophy
YNB Glucose 75mM Arginine
0.1
0.3
0.5
-0.0
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