Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6229: 14597 - K01895 ACSS, acs acetyl-CoA synthetase, at 302429 to 305318 14597 mRNA_6230: 14598 - K10688 UBE2W, UBC16 ubiquitin-conjugating enzyme E2 W, at 306149 to 307289 14598 mRNA_6231: 14599 - KOG2358 NifU-like domain-containing proteins, at 307619 to 308722 14599 mRNA_6232: 14600 - K17450 ACO2 homoaconitase, at 308954 to 311929 14600 mRNA_6233: 14601 - K16945 CDC11 cell division control protein 11, at 312446 to 314280 14601
Group Condition mRNA_6229 mRNA_6230 mRNA_6231 mRNA_6232 mRNA_6233
14597
14598
14599
14600
14601
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.9 0.6 -4.3 -0.7 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 0.2 -5.0 -0.5 -0.4
growth on oleic acid YNB Glucose 0.2 -0.3 -1.2 -1.6 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.7 0.6 -2.1 -0.3 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.2 0.1 -1.0 -1.3 -0.5
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.1 -0.7 -1.4 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.6 -0.3 -0.5 -0.3 -0.3
auxotrophy YNB Glucose 0.0 0.3 -0.6 -1.3 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy 1.0 -0.2 -1.0 -1.8 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.5 -1.1 -0.1 0.0
facs on lipid accumulation Sorted High BODIPY Gate -1.4 0.9 -0.1 -1.0 -0.2
growth on ricinoleic acid YNB Glucose 0.0 0.1 -0.8 -1.2 0.3
growth on ricinoleic acid YNB Ricinoleic Acid 1.0 0.3 -0.5 -1.5 0.2
growth on oleic acid YNB Oleic Acid 0.2 -0.3 -0.1 -0.2 0.0
auxotrophy Dropout Complete -0.1 0.3 -0.0 -0.2 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.6 0.2 -0.6 -0.9 0.8
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.2 -0.1 0.4 0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 0.2 -0.2 0.4 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.2 -0.0 0.3 0.1
growth on ypd YPD 0.0 0.3 0.2 0.5 0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 0.1 1.0 0.5 0.1
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