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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6228: 14596 - Hypothetical Protein, at 301912 to 302184
14596
mRNA_6229: 14597 - K01895 ACSS, acs acetyl-CoA synthetase, at 302429 to 305318
14597
mRNA_6230: 14598 - K10688 UBE2W, UBC16 ubiquitin-conjugating enzyme E2 W, at 306149 to 307289
14598
mRNA_6231: 14599 - KOG2358 NifU-like domain-containing proteins, at 307619 to 308722
14599
mRNA_6232: 14600 - K17450 ACO2 homoaconitase, at 308954 to 311929
14600
Group
Condition
mRNA_6228
mRNA_6229
mRNA_6230
mRNA_6231
mRNA_6232
14596
14597
14598
14599
14600
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
0.2
-5.0
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.9
0.6
-4.3
-0.7
growth on oleic acid
YNB Glucose
0.2
-0.3
-1.2
-1.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.7
0.6
-2.1
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.5
-1.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
0.2
0.1
-1.0
-1.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
1.0
-0.2
-1.0
-1.8
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.1
-0.7
-1.4
growth on ricinoleic acid
YNB Glucose
0.0
0.1
-0.8
-1.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.6
-0.3
-0.5
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-1.4
0.9
-0.1
-1.0
auxotrophy
YNB Glucose
0.0
0.3
-0.6
-1.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.6
0.2
-0.6
-0.9
growth on ricinoleic acid
YNB Ricinoleic Acid
1.0
0.3
-0.5
-1.5
growth on oleic acid
YNB Oleic Acid
0.2
-0.3
-0.1
-0.2
auxotrophy
Dropout Complete
-0.1
0.3
-0.0
-0.2
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.2
-0.1
0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.2
-0.0
0.3
ypd buoyancy
40 hrs High Buoyancy
-0.0
0.2
-0.2
0.4
growth on ypd
YPD
0.0
0.3
0.2
0.5
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
0.1
1.0
0.5
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