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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6208: 14576 - K00006 GPD1 glycerol-3-phosphate dehydrogenase (NAD+), at 249566 to 251082
14576
mRNA_6209: 14577 - K03006 RPB1, POLR2A DNA-directed RNA polymerase II subunit RPB1, at 252444 to 258337
14577
mRNA_6210: 14578 - HMMPfam-DNA replication and checkpoint protein-PF11719, at 259618 to 261776
14578
mRNA_6211: 14579 - Hypothetical Protein, at 261871 to 262723
14579
mRNA_6212: 14580 - SMART-Domain with 2 conserved Trp (W) residues-SM00456,SUPERFAMILY--SSF51045, at 263965 to 264991
14580
Group
Condition
mRNA_6208
mRNA_6209
mRNA_6210
mRNA_6211
mRNA_6212
14576
14577
14578
14579
14580
ypd buoyancy
40 hrs No Buoyancy Separation
-2.4
-2.2
1.4
auxotrophy
Dropout Complete
0.4
-0.2
-1.6
auxotrophy
YNB Glucose 75mM Arginine
0.1
0.4
-1.8
growth on ricinoleic acid
YNB Glucose
0.1
0.1
-1.0
ypd buoyancy
40 hrs High Buoyancy
0.3
-0.3
-0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
0.6
0.4
-1.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.5
-1.3
0.3
growth on ypd
YPD
0.2
0.2
-0.6
auxotrophy
YNB Glucose 75mM Methionine
0.4
0.4
-1.0
auxotrophy
YNB Glucose
0.3
-0.0
-0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.3
-0.0
0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.0
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.4
0.5
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.9
1.7
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
-0.2
1.4
growth on oleic acid
YNB Glucose
0.3
0.1
0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
0.0
1.8
growth on oleic acid
YNB Oleic Acid
0.2
0.5
1.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.7
-0.8
1.9
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.6
-0.7
2.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.8
0.2
2.1
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