Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6208: 14576 - K00006 GPD1 glycerol-3-phosphate dehydrogenase (NAD+), at 249566 to 251082 14576 mRNA_6209: 14577 - K03006 RPB1, POLR2A DNA-directed RNA polymerase II subunit RPB1, at 252444 to 258337 14577 mRNA_6210: 14578 - HMMPfam-DNA replication and checkpoint protein-PF11719, at 259618 to 261776 14578 mRNA_6211: 14579 - Hypothetical Protein, at 261871 to 262723 14579 mRNA_6212: 14580 - SMART-Domain with 2 conserved Trp (W) residues-SM00456,SUPERFAMILY--SSF51045, at 263965 to 264991 14580
Group Condition mRNA_6208 mRNA_6209 mRNA_6210 mRNA_6211 mRNA_6212
14576
14577
14578
14579
14580
ypd buoyancy 40 hrs No Buoyancy Separation -2.4     -2.2 1.4
auxotrophy Dropout Complete 0.4     -0.2 -1.6
auxotrophy YNB Glucose 75mM Arginine 0.1     0.4 -1.8
growth on ricinoleic acid YNB Glucose 0.1     0.1 -1.0
ypd buoyancy 40 hrs High Buoyancy 0.3     -0.3 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid 0.6     0.4 -1.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.5     -1.3 0.3
growth on ypd YPD 0.2     0.2 -0.6
auxotrophy YNB Glucose 75mM Methionine 0.4     0.4 -1.0
auxotrophy YNB Glucose 0.3     -0.0 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.3     -0.0 0.4
ypd buoyancy 40 hrs Low Buoyancy -0.0     -0.0 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4     0.5 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.1     -0.9 1.7
facs on lipid accumulation Sorted No BODIPY Gate -0.5     -0.2 1.4
growth on oleic acid YNB Glucose 0.3     0.1 0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.2     0.0 1.8
growth on oleic acid YNB Oleic Acid 0.2     0.5 1.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.7     -0.8 1.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.6     -0.7 2.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.8     0.2 2.1
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