Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6207: 14575 - KOG2711 Glycerol-3-phosphate dehydrogenase/dihydroxyacetone 3-phosphate reductase, at 248249 to 248882 14575 mRNA_6208: 14576 - K00006 GPD1 glycerol-3-phosphate dehydrogenase (NAD+), at 249566 to 251082 14576 mRNA_6209: 14577 - K03006 RPB1, POLR2A DNA-directed RNA polymerase II subunit RPB1, at 252444 to 258337 14577 mRNA_6210: 14578 - HMMPfam-DNA replication and checkpoint protein-PF11719, at 259618 to 261776 14578 mRNA_6211: 14579 - Hypothetical Protein, at 261871 to 262723 14579
Group Condition mRNA_6207 mRNA_6208 mRNA_6209 mRNA_6210 mRNA_6211
14575
14576
14577
14578
14579
ypd buoyancy 40 hrs No Buoyancy Separation 0.0 -2.4     -2.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.8 0.5     -1.3
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.1     -0.9
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 -0.2     0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 0.7     -0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 0.6     -0.7
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.3     -0.0
ypd buoyancy 40 hrs High Buoyancy -0.3 0.3     -0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.6 -0.5     -0.2
auxotrophy YNB Glucose -0.2 0.3     -0.0
auxotrophy Dropout Complete -0.0 0.4     -0.2
growth on oleic acid YNB Glucose -0.2 0.3     0.1
auxotrophy YNB Glucose 75mM Arginine -0.4 0.1     0.4
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.0     -0.0
growth on ypd YPD -0.1 0.2     0.2
growth on ricinoleic acid YNB Glucose 0.1 0.1     0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 0.8     0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 0.4     0.5
growth on oleic acid YNB Oleic Acid -0.0 0.2     0.5
auxotrophy YNB Glucose 75mM Methionine -0.1 0.4     0.4
growth on ricinoleic acid YNB Ricinoleic Acid 0.0 0.6     0.4
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