Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6205: 14573 - HMMPfam-Peptidase M50B-like-PF13398, at 244969 to 246074 14573 mRNA_6206: 14574 - K10524 NRK1_2 nicotinamide/nicotinate riboside kinase, at 246520 to 247686 14574 mRNA_6207: 14575 - KOG2711 Glycerol-3-phosphate dehydrogenase/dihydroxyacetone 3-phosphate reductase, at 248249 to 248882 14575 mRNA_6208: 14576 - K00006 GPD1 glycerol-3-phosphate dehydrogenase (NAD+), at 249566 to 251082 14576 mRNA_6209: 14577 - K03006 RPB1, POLR2A DNA-directed RNA polymerase II subunit RPB1, at 252444 to 258337 14577
Group Condition mRNA_6205 mRNA_6206 mRNA_6207 mRNA_6208 mRNA_6209
14573
14574
14575
14576
14577
ypd buoyancy 40 hrs No Buoyancy Separation 0.4 -0.5 0.0 -2.4  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 -0.3 -0.8 0.5  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.5 -0.5 0.7  
auxotrophy YNB Glucose -0.3 -0.1 -0.2 0.3  
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.1 -0.0 -0.3  
facs on lipid accumulation Sorted Low BODIPY Gate 0.8 -0.3 -0.7 -0.2  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 -0.1 -0.3 0.6  
growth on ricinoleic acid YNB Glucose -0.1 -0.3 0.1 0.1  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 -0.2 -0.5 0.4  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.1 -0.6 0.8  
growth on oleic acid YNB Oleic Acid -0.2 0.1 -0.0 0.2  
growth on oleic acid YNB Glucose -0.3 0.3 -0.2 0.3  
auxotrophy YNB Glucose 75mM Arginine 0.2 0.2 -0.4 0.1  
facs on lipid accumulation Sorted High BODIPY Gate -0.0 0.4 -0.0 -0.1  
facs on lipid accumulation Sorted No BODIPY Gate -0.0 0.3 0.6 -0.5  
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.1 0.2 -0.0  
ypd buoyancy 40 hrs High Buoyancy 0.5 -0.1 -0.3 0.3  
auxotrophy Dropout Complete 0.1 0.0 -0.0 0.4  
auxotrophy YNB Glucose 75mM Methionine 0.3 0.0 -0.1 0.4  
growth on ypd YPD 0.5 0.1 -0.1 0.2  
growth on ricinoleic acid YNB Ricinoleic Acid 0.5 -0.4 0.0 0.6  
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