Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6204: 14572 - KOG1618 Predicted phosphatase, at 243307 to 244867 14572 mRNA_6205: 14573 - HMMPfam-Peptidase M50B-like-PF13398, at 244969 to 246074 14573 mRNA_6206: 14574 - K10524 NRK1_2 nicotinamide/nicotinate riboside kinase, at 246520 to 247686 14574 mRNA_6207: 14575 - KOG2711 Glycerol-3-phosphate dehydrogenase/dihydroxyacetone 3-phosphate reductase, at 248249 to 248882 14575 mRNA_6208: 14576 - K00006 GPD1 glycerol-3-phosphate dehydrogenase (NAD+), at 249566 to 251082 14576
Group Condition mRNA_6204 mRNA_6205 mRNA_6206 mRNA_6207 mRNA_6208
14572
14573
14574
14575
14576
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.4 -0.5 0.0 -2.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.6 -0.3 -0.8 0.5
ypd buoyancy 40 hrs Median Buoyancy -0.3 0.1 -0.1 -0.0 -0.3
auxotrophy YNB Glucose -0.1 -0.3 -0.1 -0.2 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 -0.5 -0.1 -0.3 0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 -0.2 -0.5 -0.5 0.7
ypd buoyancy 40 hrs High Buoyancy -0.5 0.5 -0.1 -0.3 0.3
ypd buoyancy 40 hrs Low Buoyancy -0.4 0.1 0.1 0.2 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.4 0.8 -0.3 -0.7 -0.2
growth on ricinoleic acid YNB Glucose 0.2 -0.1 -0.3 0.1 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -0.1 -0.1 -0.6 0.8
auxotrophy YNB Glucose 75mM Arginine 0.0 0.2 0.2 -0.4 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 0.2 -0.2 -0.5 0.4
facs on lipid accumulation Sorted No BODIPY Gate 0.0 -0.0 0.3 0.6 -0.5
growth on oleic acid YNB Oleic Acid 0.4 -0.2 0.1 -0.0 0.2
auxotrophy Dropout Complete -0.0 0.1 0.0 -0.0 0.4
growth on oleic acid YNB Glucose 0.4 -0.3 0.3 -0.2 0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.4 -0.0 0.4 -0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine 0.0 0.3 0.0 -0.1 0.4
growth on ricinoleic acid YNB Ricinoleic Acid 0.0 0.5 -0.4 0.0 0.6
growth on ypd YPD 0.2 0.5 0.1 -0.1 0.2
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